| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4489 |
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| Symbol | |
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| ID | 5319181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 973981 |
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| End bp | 974910 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776290 |
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| Product | chitin deacetylase |
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| Protein accession | YP_001313222 |
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| Protein GI | 150376626 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.785698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGA ATTCCTATCC GCGTGACTTC GTCGGCTACG GGCGCAGGCC GCCCGAGGCG
CGTTGGCCTG GGGACGCCAA CATCGCTGTC CAATTCGTGC TCAACTATGA GGAAGGCGGC
GAAAGCTGCA TACTCGACGG CGATCCGGCG TCCGAATGTC TGCTGTCGGA GATCGTCGGC
GCTCAGCCCT GGGCCGGACA GCGCAACCTC AATATGGAGT CGATCTACGA GTATGGCGCC
CGCGCCGGTT TCTGGCGCCT GTGGCGGATG TTCACAAGCC GCGGCGTGAC GCTGACGGTC
TACGGTGTGA CGCTCGCCAT GGCACGCAAT CCGGAGGCCG TCGCCGCCAT GAAGGAAGCG
GGATGGGAGA TCGCCAGTCA CGGTCTGCGC TGGCTCGAAT ACAAGGATGT TCCCGAAGAG
GTCGAGCGCC AGCATATCCG CGAGGTCGTG CGGCTTCACA CCGAGCTGAC CGGCGAGCGC
CCCCTTGGAA TCTACCAGGG CAAGCCCTCG GCAAACACGC TCAAGCTCGT GCTGGAGGAG
GGCGGTTTCC TCTATTCCTG CGATTCTTAC GCGGATGAGC TTCCCTACTG GGTGCCGGGG
CGGACGCCCG ACAACCCGCA TCTCATCATA CCCTATACGC TCGACGCCAA CGACATGCGT
TTTGCGACCA GTCAGGGCTT CAACTCGGGC GACCAGTTCT TCACCTATCT CAAGGATACG
TTCGACGTGC TCTATGCGGA GGGCAAGGAA GGCAGCCCGA AAATGATGAA TGTCGGCCTG
CATTGCCGGC TCGTCGGACG GCCCGGCCGG GCCGCGGCGC TCGCGCGGTT CATCGATTAC
GTGACCTCCC ACGACAAGGT CTGGGTGCCG CGCCGCATCG ACATAGCGCG CCACTGGTAC
GAACATCACA AGCCGACGGA GGCGCGCTGA
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| Protein sequence | MNENSYPRDF VGYGRRPPEA RWPGDANIAV QFVLNYEEGG ESCILDGDPA SECLLSEIVG
AQPWAGQRNL NMESIYEYGA RAGFWRLWRM FTSRGVTLTV YGVTLAMARN PEAVAAMKEA
GWEIASHGLR WLEYKDVPEE VERQHIREVV RLHTELTGER PLGIYQGKPS ANTLKLVLEE
GGFLYSCDSY ADELPYWVPG RTPDNPHLII PYTLDANDMR FATSQGFNSG DQFFTYLKDT
FDVLYAEGKE GSPKMMNVGL HCRLVGRPGR AAALARFIDY VTSHDKVWVP RRIDIARHWY
EHHKPTEAR
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