| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4474 |
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| Symbol | |
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| ID | 5318176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 955315 |
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| End bp | 956850 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640776275 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313207 |
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| Protein GI | 150376611 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.882977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATA TCATTCTTGA AATGCGGGGC ATTACGAAGA CGTTTCCGGG CGTCAAGGCC
CTGGACAACG TCTCGTTCAA GGTCCGCGAA GGCGAAATCC ACGCGCTTGT CGGAGAAAAT
GGCGCCGGCA AGTCGACCTT GATGAAGGTG TTGAGCGGCG TCTATCCGGC CGGGACCTAC
GAGGGCGAAA TCCATTATGA CGGAAAACTT CGCCAGTTCA GCACGATTTC GGACAGCGAA
GATCTCGGCA TCATCATCAT CCACCAGGAG CTGGCGCTCG TTCCCCTGCT TTCGATCGCC
GAGAACATCT TTCTCGGCAA CGAGGTGGCC GAAAAGGGCA TAATCCATTG GCCGCAGACT
TTCGCACGCA CGCAGGAGCT CCTGAAGAAA GTTGGACTGA ACGAGTCGCC GGCGACGCTG
ATCACCGACA TCGGCGTCGG CAAGCAGCAG CTGGTGGAAA TTGCCAAGGC GCTTTCCAAA
AAAGTGCGCC TGCTTATCCT CGACGAACCT ACCGCATCCC TCAACGAAAA CGATTCCGAC
GCGCTTTTGA AGCTGCTCAT GGAATTCCGC AGCCAGGGCA TGACGTCGAT CATCATTTCT
CATAAGCTCA ACGAGATTAA GAAGGTTGCC GACCAGATCA CCATCCTGCG CGATGGCGGA
ACGGTGGAGA CGCTCGACTG TCACAAGGAG GAGGTCGGCG AGGACCGGAT CATCAACGGC
ATGGTCGGCC GCGCCATGGA AGACCGCTAC CCGCCGCGCG AGCCGAAGAT CGGCGACACG
CTGCTCGAGG TGAAGAACTG GAACGTCTAC CATCAGCATC ACCGCGACCG GCAGTTTCTG
CACGATGTCA GCTTCAAGGT TCGCGCCGGT GAGGTCGTAG GCATCGCCGG ACTGATGGGC
GCCGGCCGAA CCGAGACGGC GATGAGCATC TTCGGCCGGT CCTGGGGACA CAAGATCACC
GGTGACGTGA CGATGCGCGG CAAGCCCGTG GACGTGAGCA CGATCCCGAA GGCGATCAAG
GCGGGCCTTG CCTATGTGAC GGAAGACCGC AAACAGCTTG GCCTCGTGCT GATCAACAAC
ATCATGCACA ACACCACGCT TTCCAATCTC GGTGCGGTTT CCTCGAACGG CGTCATCGAC
GAGCGAAAGG AGGCTCGGGT CGCCTCGGAC TATCGCTCCA AGCTGCGCAT CCGTTCGCAC
TCTATCTATC AGGAGGCGGT CAACCTGTCG GGCGGCAACC AACAAAAGGT CGTCCTGTCC
AAGTGGCTGT TCACCAATCC CGAAGTGCTC ATACTCGACG AGCCGACCCG CGGTATCGAT
ATCGGCGCGA AATATGAGAT CTACACCATC ATCAACCAAC TCGCAGCCGA GGGCAAAGGC
ATCCTCATGA TTTCGTCGGA GATGCCGGAA CTGCTCGGAA CCTGCGATCG CATCTATGTC
ATGAACGAGG GCCGCATCGT GGCGGAGCTT TCCAAGGAGG AAGCAAGCCA GGAATCGATC
ATGCGCGCCA TCATGCGTTC AGGGGAGAAA CACTAA
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| Protein sequence | MDNIILEMRG ITKTFPGVKA LDNVSFKVRE GEIHALVGEN GAGKSTLMKV LSGVYPAGTY
EGEIHYDGKL RQFSTISDSE DLGIIIIHQE LALVPLLSIA ENIFLGNEVA EKGIIHWPQT
FARTQELLKK VGLNESPATL ITDIGVGKQQ LVEIAKALSK KVRLLILDEP TASLNENDSD
ALLKLLMEFR SQGMTSIIIS HKLNEIKKVA DQITILRDGG TVETLDCHKE EVGEDRIING
MVGRAMEDRY PPREPKIGDT LLEVKNWNVY HQHHRDRQFL HDVSFKVRAG EVVGIAGLMG
AGRTETAMSI FGRSWGHKIT GDVTMRGKPV DVSTIPKAIK AGLAYVTEDR KQLGLVLINN
IMHNTTLSNL GAVSSNGVID ERKEARVASD YRSKLRIRSH SIYQEAVNLS GGNQQKVVLS
KWLFTNPEVL ILDEPTRGID IGAKYEIYTI INQLAAEGKG ILMISSEMPE LLGTCDRIYV
MNEGRIVAEL SKEEASQESI MRAIMRSGEK H
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