| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4444 |
|---|
| Symbol | |
|---|
| ID | 5317966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 930581 |
|---|
| End bp | 931090 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640776246 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001313179 |
|---|
| Protein GI | 150376583 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.521624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCCC GGTGGGTCGT CGTGAATGAT CGGATGCAGC AAGGCTACCG GTACGCTCTC
GTTGCGCCAA TCGGCCGCGA CTTTCATGCC GATTTCCGGC CAGACTTAAC ACCCGCCGAG
ATGCTTGCGC TAGGCGTGTT CGGCGGCAAG TACATGACCG ATTGTCGCGA CGAATTCCCC
AACAGCTGGT TTGTAGGGGC CCGGCTGTCG TCGCTGCGAA AAGATCCGTC AATTAACTGT
TTCGGTGTCG ACGCCAGCCA ACCGCTCAGC GTTTGGCGAG CGAAGGGATG GATACATCCC
GAAGATCCGC GTGGCTGGTT CCAGTGGTAC TGCCGCTACC ACCAAGGTCG TCGCATGCCC
GGCGAGGACG AGCGACAGAT CGCCCGTTGG AAAGCTCTTC GCCGCCATAT CGCTCAGCTT
CGCCGAGCCT GCGAGCCTGG GGATTGCTGG TGCCGGCCGC GGCAGCGCCA GGCTCTGCTG
CATTGGGCAT ATGACAGCCG TTCGATTTAA
|
|---|
| Protein sequence | MRARWVVVND RMQQGYRYAL VAPIGRDFHA DFRPDLTPAE MLALGVFGGK YMTDCRDEFP
NSWFVGARLS SLRKDPSINC FGVDASQPLS VWRAKGWIHP EDPRGWFQWY CRYHQGRRMP
GEDERQIARW KALRRHIAQL RRACEPGDCW CRPRQRQALL HWAYDSRSI
|
|---|
| |