Gene Smed_4434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4434 
Symbol 
ID5318147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp923185 
End bp923625 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content57% 
IMG OID640776236 
Producttransmembrane pair domain-containing protein 
Protein accessionYP_001313169 
Protein GI150376573 
COG category[S] Function unknown 
COG ID[COG4125] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.521452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATGC GCACGTTCCC GGACCGGATC CGGCACACTT TGTTGTTTGA GGTCATCGGC 
TTGATGATCG TCACGCCGCT CGCGGCCTAT CTGTTCCATA AGCCGATCAT GCATATGGGT
GTCGTCGGCA TCGGCTCCGC CACGATTGCG ACGATCTGGA ACTTCCTGTT CAACCTCGGC
TTCGATCACG GCATGCGCCG TATGTTCGGG TCCACTACGA AGACCTTCAG AATACGTCTC
GTGCACACCG TGTTGTTCGA GATCGGCCTG TTGGCGATCC TGCTGCCACC AATCGCCTGG
TACCTGAACA TGGGCCTGCT CGAAACATTG CAGCTCGACC TCGCCATTGT AGCCTTCTAT
CTGGTTTATA ATTTCGTCTT CAACCTCGCC TATGACCGGG TCTTCCCGAT CCCGGGCGCG
CCGCGAGCCG AATACGCATG A
 
Protein sequence
MKMRTFPDRI RHTLLFEVIG LMIVTPLAAY LFHKPIMHMG VVGIGSATIA TIWNFLFNLG 
FDHGMRRMFG STTKTFRIRL VHTVLFEIGL LAILLPPIAW YLNMGLLETL QLDLAIVAFY
LVYNFVFNLA YDRVFPIPGA PRAEYA