| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4396 |
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| Symbol | |
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| ID | 5319161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 892367 |
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| End bp | 893479 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776200 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313133 |
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| Protein GI | 150376537 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.625138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.658591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGG TCACCCTGAG GAATGTCAGC AAGACCTTCG GTACCTATGA CGTGATCCGG
TCCATCGACC TCGAGATCGA GGACGGCGAA TTCGTCGTCT TCGTCGGTCC GTCCGGTTGC
GGGAAGTCGA CGCTTTTGCG ATTGATTGCC GGTCTCGTCC CGGTTTCCGG CGGCGACGTA
TTTATCGGTG GCGACCAGGT GACGGATGTG CCCGCTTCGA AGCGAGGACT TGCCTTCGTC
TTCCAGTCCT ATGCGCTCTA CCCCCATATG AACGTCGCGC GGAACATCGG CTTCGCGCTC
GAAACGGCGC GGCTCGGCAA AGACGAGATG CGGCGCCGTG TCGCGAGGGT CGCCGACATG
CTGAAGATCG GCCATCTGCT CGAGCGGCGG CCGCGCCAGC TTTCCGGCGG TCAGCGGCAG
CGCGTCGCGA TCGGTCGAGC GCTGGTCGGC CAGCCGGAGG TTTTCCTCTT CGATGAGCCG
CTTTCCAATC TCGACGCGGA CCTGCGCATG GAAATGCGCT TCGAGATCGC CAAGCTGCAT
GCCGACGTCA GGACGACGAT GATCTATGTC ACCCACGATC AGACGGAAGC GATGACGCTC
GCCGACCGGA TCGTGATCCT CAATCACGGG AAGATCGAGC AGGTGGGGCG GCCTCGCGCG
CTGTACGACC GGCCGGCAAA TCGCTTCGTT GCCGGGTTCC TCGGCAGTCC GAGGATGAAT
TTCGCCCCTT TGGAGACGGC CGGTGCGGCC GTTTCGATGC TCAGGGGTGC AGGTGGCTTC
ACCTATGCGG CCGATCTCGC TGCGGCAGAA GGAACGCCCG TCGAGCTCGG ATTGCGGCCG
GAAAGTCTGC AGCTCGTCGG TGCGGATGTG AAGGGCGCCA TACGCGGAAC CTTCGAGCGG
ATGGAGGATC TCGGCTACGA ATATGTCTGC TATGTGCGTC TCACCGAAAC GCTGGTCTGG
ACGATCCGTG CGACGGGGAG CCCGCCGCAA ATCACGCCCG GCGAGCCCGT CGGCCTGACC
TGGCAGCCGG AAAGTCTCTA CCTCTTCGGA GAGGATGGCA GGCGCATCGA CCACCGCACG
AGCATTCCGC TGTCCCTTGG AGCGTCGTCG TGA
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| Protein sequence | MASVTLRNVS KTFGTYDVIR SIDLEIEDGE FVVFVGPSGC GKSTLLRLIA GLVPVSGGDV
FIGGDQVTDV PASKRGLAFV FQSYALYPHM NVARNIGFAL ETARLGKDEM RRRVARVADM
LKIGHLLERR PRQLSGGQRQ RVAIGRALVG QPEVFLFDEP LSNLDADLRM EMRFEIAKLH
ADVRTTMIYV THDQTEAMTL ADRIVILNHG KIEQVGRPRA LYDRPANRFV AGFLGSPRMN
FAPLETAGAA VSMLRGAGGF TYAADLAAAE GTPVELGLRP ESLQLVGADV KGAIRGTFER
MEDLGYEYVC YVRLTETLVW TIRATGSPPQ ITPGEPVGLT WQPESLYLFG EDGRRIDHRT
SIPLSLGASS
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