| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4373 |
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| Symbol | |
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| ID | 5317982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 874380 |
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| End bp | 875720 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776177 |
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| Product | general substrate transporter |
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| Protein accession | YP_001313110 |
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| Protein GI | 150376514 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGTG CAATTCAACA ATCCCTGGGA CCGTCGTCCT CCTCGATGGA GCGCGATGCG
CGGCGCATTC ACGACGACAG GCCGGTATCT GCAGGCAACA TAGCCATTGG CGTCGTGATC
GGCCGCGCAG CGGAGTTCTT CGATTTCTTC GTTTTTGGCA TCGCCTCCGT CGTCGTTTTT
CCGCAGCTCT TCTTTCCCTT CGCGCCCGAC CGGCTGACCG CTACGCTCTA TTCCTTCGCC
ATCTTTGCAC TCGCCTTCAT GGCAAGGCCG GTGGGTTCGC TGGTCTTCAT GGCCATCGAC
CGGACCTATG GCCGAGGCGT GAAACTAACG ATTGCCCTTT TCCTCCTCGG CGGATCGACC
GCCTCCATCG CCTTTCTGCC CGGCTACGCA ACGCTCGGCG GCTGGTCCAT CCTGCTGCTT
GCCGTCTTCC GTCTCGGTCA GGGATTTGCG CTCGGCGGGG CCTGGGATGG GCTCGCCTCG
CTTCTCGCCC TCAACGCGCC GCAGCATCAC CGCGGCTGGT ATGCGATGAT CCCACAGCTA
GGGGCGCCGC TCGGCTTCAT GCTGGCGAGT GCGCTGTTTG CCTACTTCCT CGCTTCGCTC
TCGCAAGCGG ACTTTCTTGC CTGGGGCTGG CGCTATCCGT TCTTCGTCGC CTTTGCCATC
AACGTCGTTG CATTATTCAC GCGCCTGCGG CTCGTCATGA CGAAGGAATT CGGAACCCTG
CTCGATCTGC ACGAGCTTCA GGCAAGCCGG GTCACGGAGG TGCTCAGAGT AAATGGTGGG
CACGTTCTGG TCGGTGCGTT CGTGCCGCTT GCAAGCTTCG CTCTCTTCCA TCTGGTGACA
GTGTTCCCGC TGAGCTGGGT GGAAATATAC ACGGATCACG GCGCAAGCTC CTTCCTGATG
GTACAGTTCC TTGGCGCGGT GTGCGGGATC GTCGCGATCG TTGCTTCCGG GCTCATTGCC
GATCGCATCG GCCGGCGCAA TCATCTTGGT ATGTGCGCGG TGCTGATCGC GATTTTCAGC
TTTGTAGCCC CAATGCTGCT TCAGTCGGGC GCGACCGGTC GCGAAATGTT CGTGATTGTC
GGCTTCACAA TCCTCGGCCT CTCCTTCGGG CAGGCCGCCG GGGCGGTCGC GTCGCGCTTC
GGCAGGGCCT ACCGCTATAC GGGGGCGGCG CTGACCTCGG ATCTGTCGTG GCTGATAGGG
GCCGGGTTTG CACCGCTGGT GGCACTTGGG CTCACCAGTC GCTTCGGCCT CGCTTTCGCG
GGATATTACC TTCTCTCGGG CGCGCTTTGC ACGATACTGG CGCTTATCTT CAGCAAGACG
CTCGAGATCA ACAACGAATA G
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| Protein sequence | MNGAIQQSLG PSSSSMERDA RRIHDDRPVS AGNIAIGVVI GRAAEFFDFF VFGIASVVVF
PQLFFPFAPD RLTATLYSFA IFALAFMARP VGSLVFMAID RTYGRGVKLT IALFLLGGST
ASIAFLPGYA TLGGWSILLL AVFRLGQGFA LGGAWDGLAS LLALNAPQHH RGWYAMIPQL
GAPLGFMLAS ALFAYFLASL SQADFLAWGW RYPFFVAFAI NVVALFTRLR LVMTKEFGTL
LDLHELQASR VTEVLRVNGG HVLVGAFVPL ASFALFHLVT VFPLSWVEIY TDHGASSFLM
VQFLGAVCGI VAIVASGLIA DRIGRRNHLG MCAVLIAIFS FVAPMLLQSG ATGREMFVIV
GFTILGLSFG QAAGAVASRF GRAYRYTGAA LTSDLSWLIG AGFAPLVALG LTSRFGLAFA
GYYLLSGALC TILALIFSKT LEINNE
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