| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4336 |
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| Symbol | |
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| ID | 5318094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 834375 |
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| End bp | 835922 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776141 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001313074 |
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| Protein GI | 150376478 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0623029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00463044 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGTTCG AGCAATTCCT CATCAGGAAC GCCGCGGCGA ACGGGGCAAA AACGGCGCTG
GTCACCGATC GCCGGCGGCT CAGCTATGCC GAACTGGACG ATCTTTCAAC GCGTCTCGCG
GCTGCTCTTG CCGCAAACGG CGTGAAGCGG AACGATCGCG TTCTGGCGTT CATGGATAAT
TGCTGGGAGG CGGCGGTCGC AATCTTCGCG ATCCTCAAGG CCGGAGCCAC CTTCAGTCCG
ATCAACGCTT CGACCAAAGC AGACAAGCTT GCCTACGTAA TCGCGGATTG CGAGGCGGCG
GCAATCCTGA CGCAGGCGAA ACTGATGCCG GTCGTTACCG AGGCGCTTGC GCTTGCTCCC
GGTTATCGGC CTTTCATTGC CTCGGCCGCG GCGCCAGGCG GGCGCATGCC CGACGGTGCC
GCTTCCTTCG AGGAATGCCT GACAGCCGTA CCCGCCGCTG TTTCGCACGG GGGTATCGAC
ATCGATCTCG GCATGCTGAT TTATACCTCG GGGTCGACGG GACGTCCCAA GGGCGTGATG
ATGACGCATC GCAACATCGA CGCTGCCTCA GAATCGATCA CTACCTATCT CCGCAACACG
CCTGAAGACA TCATTCTGAA CGTACTGCCG CTCGCTTTCG ACTATGGTCT TTACCAGTTG
CTGATGGCGG TCCGGCTCGG CGCGACGCTC GTGCTCGAAA AATCATTCGC CTTCCCGCAG
GCGATTTTCG ACCGGATTCG GGCCGAGGGT GTCACCGGCT TCCCACTCGT GCCGACCATG
GCGGCGATGA TCCTTCAGAT GCGCGATCTC GAGCCCGGCT TCCTGCCAAG CCTTCGCTAT
CTCTCCAACA CCGCGGCAGC TCTCCCGCCG GCCCATATTG CGCGCCTGAG GGAGCTTTTT
CCCGGCGCCC GGCTCTATTC CATGTACGGC CTGACGGAGT GCAAGCGCTG CACCTATCTG
CCGCCGGAGG AGCTGGATCG CCGGCCGGGT TCCGTGGGGA TCGCGATACC GAACACGGAA
GCCTTCGTGG TCGATGACGA GGGAAACCGG CTACCGCCCG GTGTGCCTGG TGAACTGGTT
ATCCGCGGCC CGCATGTGAT GCAGGGCTAT TGGCGCAACG CTGCCGCGAC CGAGCGCATG
CTGCGCTCCG GTCCTGATCC GTGGGAAAGG GTGCTTTATA CCGGCGATCT CTTCCGCACC
GACGAGGAGG GCTTCCTCTA CTTCGTCGGC CGCAAGGACG ACATCATCAA GACCCGCGGC
GAAAAGGTGG CTCCCAAGGA GGTCGAGACC GTGCTGCACG CTCATCCGGG CGTAGCCGAA
GCCGTGGTCA TCGGCGTGCC GGATCCGGTG CTCGGTGCTG CGATCGGCGC GCTCGTCGTG
CTGTCGGACC CGTCTGTGAC CGAGAGGGAG ATTATCCGCC ACTGCGCCCG CCATCTCGAG
GATTTCATGG TGCCGAAAAT CGTCGAGTTC CGGGCTGAAC TGCCGAAGAC CGATACCGGA
AAAGTCAGCC GCCGCCTCGC GGCCGAAACA TTGGAGCCAG CAGAATGA
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| Protein sequence | MRFEQFLIRN AAANGAKTAL VTDRRRLSYA ELDDLSTRLA AALAANGVKR NDRVLAFMDN
CWEAAVAIFA ILKAGATFSP INASTKADKL AYVIADCEAA AILTQAKLMP VVTEALALAP
GYRPFIASAA APGGRMPDGA ASFEECLTAV PAAVSHGGID IDLGMLIYTS GSTGRPKGVM
MTHRNIDAAS ESITTYLRNT PEDIILNVLP LAFDYGLYQL LMAVRLGATL VLEKSFAFPQ
AIFDRIRAEG VTGFPLVPTM AAMILQMRDL EPGFLPSLRY LSNTAAALPP AHIARLRELF
PGARLYSMYG LTECKRCTYL PPEELDRRPG SVGIAIPNTE AFVVDDEGNR LPPGVPGELV
IRGPHVMQGY WRNAAATERM LRSGPDPWER VLYTGDLFRT DEEGFLYFVG RKDDIIKTRG
EKVAPKEVET VLHAHPGVAE AVVIGVPDPV LGAAIGALVV LSDPSVTERE IIRHCARHLE
DFMVPKIVEF RAELPKTDTG KVSRRLAAET LEPAE
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