| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4306 |
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| Symbol | |
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| ID | 5319310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 801139 |
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| End bp | 803187 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776111 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_001313044 |
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| Protein GI | 150376448 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0651981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAA TCCTGGGTTC GACCGGCTAC GATATACTTC AAGGTACGGA TGAGGCAGAC
CATATCTGGG GACTGCACGG TGGCGATACG ATCGACGCGG GCGGCGGCGA CGATTTCGTC
GATGGCGGCG ATTTAAGCGA CGTGTTGACG AGTTCGAGCG GCTATGACCG GCTGCACGGC
GGCGCCGGCG ATGACCAGAT CGTCCTGACC GGTACCGGCG GGGCCGTCAC CGGAGGCCTC
GGCTTTGACA GGTTGACCGT GGATATCTCG ATGCTGTCCG ATCAGCTGGT CTTCAACGGT
GTAAGCGGCC ACGGCATCAT CGGATACGGG AGCGCCGAGG AACGGCACAT CTTTTTCCAT
GACGTCGAAT GGCTCAGCAT CGTTTCAGGA AGCGGCAACG ATCGCATCGT GGGGACGGCG
GGTCACGACA GGATCTCGAC CGGAGTCGGC ATCGACGTCG TCGTGGCCGG GGCGGGAAAC
GACGTCATCA CGAATACGGG CGGCCAGGAC CGGCTCGAGG GCGGCGACGG GAACGATCGC
TTCGTGCTCG TGGGCACCGG CAGCACCGTC TTCGGCGGTG CTGGAGACGA TACATTGACA
CTCGATCTGG CTGCGACCTT GGGCGATATC GTGTTCAACG CGAACACCGG CCACGCGATT
ATCGCAAGCC GAACGCCTGA CGAGCGCCAC GTCTTCGCCC AGCATAGTGA GATCGAGCGG
ATTGAAGTGA TCACTGGCAG CGGAAACGAC CGGGTCCAGG GGACCACCTC CGGGGACGTC
ATCAAGACGG ACGCCGGAGA CGACGTGGTC GATGGCGGAG CGGGCGACGA TTCGATCACC
GACGGGAGCG GCGCCAACCA CCTTTCAGGC GGCGACGGCT CCGACCTCAT TACGACCACG
CTTTATTCCG CTTCGGTCGA CGGGGGAGCG GGCAGGGATT CGGTGCGAAT CGAGGAACGC
TCACGTATGA GCGACGTCGC CATTGACTTC GTTTCGGGGA CGGCGTCGAC CCGCACGGTC
TTTCGCAACA TTGAAACGGC CAGTCTCGCA CTCGGAGCCG GCAACGACGC GGTGATCACG
ACGGATTTCC TTGCCATCTT CGTAGATGCC GGCGCGGGCG ACGACCGCCT CGTAGGCGGA
GCCCGGAGCG ATGCGTTCCA CGGCGAGGAC GTCAACGACC GCATCGATAG CGGCGCGGGC
AACGACACGA TCACGACCGG CCTTGGCGAT GACCTTGCTT CCGGCGGCGA CGGCAATGAC
TCGCTCGCCA ATGACGGCGG CAAGGATATC CTGGATGGCG GGGCGGGCGA CGACTGGATT
GCCGACGCCA TTCCCGGCAG CGGCAGCCTG GGCGATGGAT CGGTCATGCT CGGCGGCGAC
GGAAATGATG CATTCAGGGC TTCTTTCACG GGAGAGGTGG ATGGAGGGGA TGGGCGCGAC
TTGCTCCAGT TGCGCCTCGG ATCGCTCTCG GCTGCAATCG ACTTTGATGC GGCGCAGGGA
GCGATCCAGA CCGGATTGAC CTTCGCCAAT ATCGAGGACT TCACGGTAAC GACCGGAGTT
GCGAACGATG TGCTCCGGGG TGGAGACGGT AACGATGAGT TCGATTCTCT GAGCGGCAAC
GACCTTCTCG AAGGGCACGG CGGAAACGAC ATCCTGCGCG GATATTCGGA TTGGGACCGG
CTGTTCGGCG GCGATGGCGA CGACCGGCTC GAGGGCGGCC CGCATGACGA CCTTTTGAGC
GGCGGCAACG GCACCGATAC GCTGATCGGC GGCACCGGCG CGGACACGTT TCTCTGGTCG
GACGAGGTCG CCGGCCAGAG CGGCATCGAT CACATCGTAG ACTTGGACTT TGGCGACGTC
ATAGCCTTTT CCGCTGCCGC TTGTGAGAGG ACCGGCATTC ACGACCATGC GGGCTTCGTT
GCCGCTGCAA CCAACACGGC CGACGGTGTC TATGTCGCCT TCAACGGCTC CGCTGCCGAC
GGCATCCTGA TCGAAAATGC TTTGATTGCA ACTCTGACCG CGGACGACCT GGTTTTCGGT
TTCGCTTGA
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| Protein sequence | MAAILGSTGY DILQGTDEAD HIWGLHGGDT IDAGGGDDFV DGGDLSDVLT SSSGYDRLHG
GAGDDQIVLT GTGGAVTGGL GFDRLTVDIS MLSDQLVFNG VSGHGIIGYG SAEERHIFFH
DVEWLSIVSG SGNDRIVGTA GHDRISTGVG IDVVVAGAGN DVITNTGGQD RLEGGDGNDR
FVLVGTGSTV FGGAGDDTLT LDLAATLGDI VFNANTGHAI IASRTPDERH VFAQHSEIER
IEVITGSGND RVQGTTSGDV IKTDAGDDVV DGGAGDDSIT DGSGANHLSG GDGSDLITTT
LYSASVDGGA GRDSVRIEER SRMSDVAIDF VSGTASTRTV FRNIETASLA LGAGNDAVIT
TDFLAIFVDA GAGDDRLVGG ARSDAFHGED VNDRIDSGAG NDTITTGLGD DLASGGDGND
SLANDGGKDI LDGGAGDDWI ADAIPGSGSL GDGSVMLGGD GNDAFRASFT GEVDGGDGRD
LLQLRLGSLS AAIDFDAAQG AIQTGLTFAN IEDFTVTTGV ANDVLRGGDG NDEFDSLSGN
DLLEGHGGND ILRGYSDWDR LFGGDGDDRL EGGPHDDLLS GGNGTDTLIG GTGADTFLWS
DEVAGQSGID HIVDLDFGDV IAFSAAACER TGIHDHAGFV AAATNTADGV YVAFNGSAAD
GILIENALIA TLTADDLVFG FA
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