Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4297 |
Symbol | |
ID | 5318460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 790851 |
End bp | 791630 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640776102 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001313035 |
Protein GI | 150376439 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.32686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.261339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCTGGC GTGGCTGTGC GCGAACCCCT CCGAGCGAGT TGACGATGAC CGCTTCCCCG AACGACGAAC CGCGACCGCC GCTTCTGCTT CTGCCAGGCA CCGCGTGCGA CCAGCGAGTC TTTGCGTCCC TGATCGACAG GCTCGGCGAT TATCCGGTCC TGATCGGGGA CATGGGCGGC GCTCGGACAA TGGCGGCGCT CGCCGGAAAT ATCCTTGCGG CTGCACCGCC CTATTTTCTG CTCGCCGGCT TTTCGCTTGG CGGCATTTGC GCGCTTGAAA TGGTGGCGCA GCAGCCGGAG CGGATCGGAA AGCTCGCTCT GATCGATACG ACCGCGCGCC CCGATCCGGC AGAAAATGCC GCGGTCCGGC GCAAGGCGGT TGCGGATGCG CGGGAGAAGG GAATGGACGG GTTTATCCTT GATAACTGGC CGCGACTCGT CGCCCCGACC AATGTCCATG ACGGAAGCCT GCGCGACACG ATCGTCGCCA TGGCGCGCGA TTGCGGGCCT GACCGGCTTG CCGAGCACGC GGAAGTCGCC ATCAGCCGCG CCGACAGCCG GCGGCGTCTT GCCGAGATCA GGCAACCGAC GCTGGTCCTT GCAGGAGCGC ATGAGGAGGT GTGCCCGCTC GATGCGCAAC AGGAACTCGC TGCCGGAATT CCCGGCGCGG AGCTCCATCT CATCGCAGAA GCAGGCCATT TCGCACCGCT TGAGAACCCC GATGCCGTGG CACTCGTCAT GAAGCGCTGG CTTGAGGCCG GTTCCGGCCC CTTTTCGTAA
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Protein sequence | MAWRGCARTP PSELTMTASP NDEPRPPLLL LPGTACDQRV FASLIDRLGD YPVLIGDMGG ARTMAALAGN ILAAAPPYFL LAGFSLGGIC ALEMVAQQPE RIGKLALIDT TARPDPAENA AVRRKAVADA REKGMDGFIL DNWPRLVAPT NVHDGSLRDT IVAMARDCGP DRLAEHAEVA ISRADSRRRL AEIRQPTLVL AGAHEEVCPL DAQQELAAGI PGAELHLIAE AGHFAPLENP DAVALVMKRW LEAGSGPFS
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