Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4241 |
Symbol | |
ID | 5318002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 726483 |
End bp | 727631 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640776046 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001312979 |
Protein GI | 150376383 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATGG ATTTTCGCCT GTCGGAGGAG CAGGAGGCCA TCCGCACGAT GGCGTTCGAT TTTGCGCGGG ACGAGATCGC GCCCCACGCC GTCGACTGGG ACCAGCAGAA GCACTTTCCT GTGGAGACCT TGCGCGCGGC GGCCGCGCTG GGGATGGCCG GCATCTATGT GCGCGACGAT GTCGGCGGAA CGGGTCTTAC CCGTCTCGAC GCGGCCATGA TCATCGAGGC GCTCGCGACC GGCTGCCCCG CGATCGCCTC CTTCGTTTCG ATCCACAATA TGTGCGCCGG CATGATCGAC CGCTACGGCA CGGACGAGCA GCGCCAGCGC CTGCTTCCGC CGCTTCTCAC CATGGACGTC CTGGCGAGTT ATTGCCTGAC GGAGCCCGGG TCCGGCTCGG ACGCGGCCGC GCTCAAGACA AAGGCGGTGC GCGAGGGTGA GGCCTATCTG CTTACCGGCC AGAAACAGTT CATTTCCGGC GCAGGAGTGT CCGGGCTCTA TATCGTCATG GCGCGCACTG GCGAGGAGGG GCCGAAGGGT ATCTCCGCCT TCGTCGTCGA GAAGGACGCT CCGGGGCTGA CCTTCGGCGC CAATGAGAAG AAGATGGGCT GGCATGCCCA GCCGACGCGG GCGGTGATGC TCGACAGTGT TCGCGTTCCC GTCGAGAATC GCCTGGGGGC CGAGGGCGAG GGCTTCAGGA TCGCCATGGC CGGCCTCGAC GGCGGAAGGC TCAACATCGC CGCCGCCTCG CTCGGCGGCG CGCAATCCGC TTTCGACAAG GCGCTCGCCT ACGTCCAGGG GCGCCGCGCA TTCGGCAAGG CGATCGGCGA ATTCCAGGCG TTGCAGTTCC GCCTTGCCGA CATGGCTACG GATCTGGAAA TCGCCCGGAC ATTCCTCTGG CGGGCGGCCT CCGCCCTCGA TGCGGCGGAC CCGGAGGCCA CGAAGCTTTG CGCCATGGCC AAACGTTTTG TCACGGATCG CTGCTTTGCT GTCGCCAATG ACGCACTGCA ATTGCATGGC GGCTACGGCT ATCTCGCCGA CTACGGCGTC GAGAAGATCG TCAGGGATCT GCGGGTGCAC CAGATACTCG AAGGCACAAA CGAAATCATG CGGCTGATCG TGTCGAGGGC GATCACGGGA CGGAAATAG
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Protein sequence | MHMDFRLSEE QEAIRTMAFD FARDEIAPHA VDWDQQKHFP VETLRAAAAL GMAGIYVRDD VGGTGLTRLD AAMIIEALAT GCPAIASFVS IHNMCAGMID RYGTDEQRQR LLPPLLTMDV LASYCLTEPG SGSDAAALKT KAVREGEAYL LTGQKQFISG AGVSGLYIVM ARTGEEGPKG ISAFVVEKDA PGLTFGANEK KMGWHAQPTR AVMLDSVRVP VENRLGAEGE GFRIAMAGLD GGRLNIAAAS LGGAQSAFDK ALAYVQGRRA FGKAIGEFQA LQFRLADMAT DLEIARTFLW RAASALDAAD PEATKLCAMA KRFVTDRCFA VANDALQLHG GYGYLADYGV EKIVRDLRVH QILEGTNEIM RLIVSRAITG RK
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