Gene Smed_4241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4241 
Symbol 
ID5318002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp726483 
End bp727631 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content65% 
IMG OID640776046 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001312979 
Protein GI150376383 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATGG ATTTTCGCCT GTCGGAGGAG CAGGAGGCCA TCCGCACGAT GGCGTTCGAT 
TTTGCGCGGG ACGAGATCGC GCCCCACGCC GTCGACTGGG ACCAGCAGAA GCACTTTCCT
GTGGAGACCT TGCGCGCGGC GGCCGCGCTG GGGATGGCCG GCATCTATGT GCGCGACGAT
GTCGGCGGAA CGGGTCTTAC CCGTCTCGAC GCGGCCATGA TCATCGAGGC GCTCGCGACC
GGCTGCCCCG CGATCGCCTC CTTCGTTTCG ATCCACAATA TGTGCGCCGG CATGATCGAC
CGCTACGGCA CGGACGAGCA GCGCCAGCGC CTGCTTCCGC CGCTTCTCAC CATGGACGTC
CTGGCGAGTT ATTGCCTGAC GGAGCCCGGG TCCGGCTCGG ACGCGGCCGC GCTCAAGACA
AAGGCGGTGC GCGAGGGTGA GGCCTATCTG CTTACCGGCC AGAAACAGTT CATTTCCGGC
GCAGGAGTGT CCGGGCTCTA TATCGTCATG GCGCGCACTG GCGAGGAGGG GCCGAAGGGT
ATCTCCGCCT TCGTCGTCGA GAAGGACGCT CCGGGGCTGA CCTTCGGCGC CAATGAGAAG
AAGATGGGCT GGCATGCCCA GCCGACGCGG GCGGTGATGC TCGACAGTGT TCGCGTTCCC
GTCGAGAATC GCCTGGGGGC CGAGGGCGAG GGCTTCAGGA TCGCCATGGC CGGCCTCGAC
GGCGGAAGGC TCAACATCGC CGCCGCCTCG CTCGGCGGCG CGCAATCCGC TTTCGACAAG
GCGCTCGCCT ACGTCCAGGG GCGCCGCGCA TTCGGCAAGG CGATCGGCGA ATTCCAGGCG
TTGCAGTTCC GCCTTGCCGA CATGGCTACG GATCTGGAAA TCGCCCGGAC ATTCCTCTGG
CGGGCGGCCT CCGCCCTCGA TGCGGCGGAC CCGGAGGCCA CGAAGCTTTG CGCCATGGCC
AAACGTTTTG TCACGGATCG CTGCTTTGCT GTCGCCAATG ACGCACTGCA ATTGCATGGC
GGCTACGGCT ATCTCGCCGA CTACGGCGTC GAGAAGATCG TCAGGGATCT GCGGGTGCAC
CAGATACTCG AAGGCACAAA CGAAATCATG CGGCTGATCG TGTCGAGGGC GATCACGGGA
CGGAAATAG
 
Protein sequence
MHMDFRLSEE QEAIRTMAFD FARDEIAPHA VDWDQQKHFP VETLRAAAAL GMAGIYVRDD 
VGGTGLTRLD AAMIIEALAT GCPAIASFVS IHNMCAGMID RYGTDEQRQR LLPPLLTMDV
LASYCLTEPG SGSDAAALKT KAVREGEAYL LTGQKQFISG AGVSGLYIVM ARTGEEGPKG
ISAFVVEKDA PGLTFGANEK KMGWHAQPTR AVMLDSVRVP VENRLGAEGE GFRIAMAGLD
GGRLNIAAAS LGGAQSAFDK ALAYVQGRRA FGKAIGEFQA LQFRLADMAT DLEIARTFLW
RAASALDAAD PEATKLCAMA KRFVTDRCFA VANDALQLHG GYGYLADYGV EKIVRDLRVH
QILEGTNEIM RLIVSRAITG RK