| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4237 |
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| Symbol | |
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| ID | 5318281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 718931 |
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| End bp | 721069 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776042 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001312975 |
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| Protein GI | 150376379 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATA AAACCATCAA GGATTGGGAA GCCCTCGCCG AGAAAGAACT CAAGGCCGGC
CCCGAGAGCC TCACCTGGCA CACGCCTGAG GGTATCGACG TCAAGCCCCT CTATACGAGC
GATGACACCT CAGGCATGGG CGATCTCAAC TCGCTCCCCG GTTTCGAACC TTTCCTGCGC
GGTCCGCGCG CCACAATGTA TGCCGGCCGG CCCTGGACGA TCCGGCAATA TGCCGGTTTC
TCGACGGCTG AAGCCTCGAA CGCCTTCTAC CGCCGCAACC TTGCTGCCGG ACAACAGGGT
GTCTCCGTCG CCTTCGACCT CGCCACGCAC CGCGGCTACG ACAGCGACCA TCCCCGCGTC
GAGGGCGACG TCGGCAAGGC GGGTGTCGCG ATCGACTCGG TGGAAGACAT GAAGATCCTG
TTCGACGGGA TCCCGCTCGA CAGGATCTCC GTCTCGATGA CCATGAATGG CGCCGTGATC
CCGATCCTCG CCTCCTTCAT CGTCGCCGGC GAGGAACAGG GTGTCAGCCG CGACAAGCTC
TCCGGGACGA TCCAGAACGA CATTCTCAAA GAGTTCATGG TCCGCAACAC CTATATCTAT
CCGCCGGAAC CCTCGATGCG GATCGTCGCC GACATCATCG AATACACGGC CAAGGAGATG
CCGAAGTTCA ATTCGATCTC GATCTCCGGC TATCACATGC AGGAGGCCGG GGCGACGCTC
GTGCAGGAGC TAGCCTTTAC TCTTGCCGAC GGGCGCGAAT ATGTGCGCGC GGCGCTCGCC
AAGGGCCTCA ATGTCGACGA TTTTGCCGGC CGGCTCTCCT TCTTTTTCGC GATCGGCATG
AACTTCTTCA TGGAGGCGGC GAAGCTGCGC GCCGCTCGGC TCCTCTGGAC ACGGATCATG
AAGGAGTTCA AACCCGAGAA GGCGTCTTCG CTGATGCTGC GGACGCACTG CCAGACGTCG
GGCGTATCGC TCCAGGAACA GGATCCTTAC AACAACATCA TCCGCACCGC TTTCGAAGCG
ATGTCGGCAG TGCTCGGCGG TACGCAATCG CTTCACACCA ATTCCTTCGA CGAAGCGATG
GCACTTCCCA CGGATTTCTC CGCCCGCATC GCGCGCAACA CGCAGCTCAT CCTGCAGCAC
GAAACCGGAG TGACCAGGGT CGTCGATCCG CTTGCCGGCT CCTATTACGT CGAGAGCCTG
ACCAACGAAC TTGCTGAAAA AGCCTGGGCG CTCATCGAGG AGGTGGAGGC ATTGGGCGGC
ATGACGAAAG CGGTCAATGC CGGCCTGCCG AAGCGGCTGA TCGAGGAGGC AGCGACCCGA
CGTCAGGCGG CGGTCGACCG CGGCGAGGAG GTCATCGTCG GGGTCAACAG GTACCGGCTC
GAGAACGAGC AGCCGATCGA CATTCTCCAG ATCGACAACG CCGCAGTCCG GACGGCACAG
ATCAAGCGGA TCGAGGAGAC CAGGCGCCGT CGCAACTCAC AGAAGATGAA GGAAGCGCTT
GACACGCTGG CCGATGTGGC GCGCAGCGGC AAGGGCAATC TGCTTGCCGC CGCGCTCGAG
GCTGCGCGGG CACGCGCCAC CGTCGGCGAA ATCACCGACG CCATGCGCGA GGCTTTCGGC
GATTACACCG CCGTGCCGGA AGTCGTCACC GATATTTACG GCCGGGCCTT CGAGGGCGAC
CCCGAGCTCG GCGTGCTGGC CGGGCGGCTC GGCGAGGTGA CGAAGCGGCT GGGGCACAAG
CCCAAAATCA TGGTCGCCAA GCTCGGGCAG GACGGGCATG ACCGCGGGTC CAAGGTGATC
GCCTCCGCCT TTGGTGACAT CGGTTTCGAC GTCGTCGCAG GCCCGCTGTT CCAGACGCCG
GAGGAGGCGG CCGAACTGGC GCTCGCCGAG GAGGTCACCG TTCTCGGGGT TTCATCGCTT
GCCGCGGGCC ACAAGACGCT GATGCCGCAA CTCGCCGAGG CACTGAAGGA GCGCGGCCGC
GAGGACATCA TCCTGGTCTG CGGCGGCGTC ATTCCCCGGC AGGATTACGC GTATCTGATG
GAAAACGGCG TTTCAGCGGT CTTCGGCCCC GGCACCCACG TGCTCGACGC CGCGCGCGCT
ATTCTGGATC TGATCGAAGG CAAGCGGCGA AACCTGTAA
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| Protein sequence | MPDKTIKDWE ALAEKELKAG PESLTWHTPE GIDVKPLYTS DDTSGMGDLN SLPGFEPFLR
GPRATMYAGR PWTIRQYAGF STAEASNAFY RRNLAAGQQG VSVAFDLATH RGYDSDHPRV
EGDVGKAGVA IDSVEDMKIL FDGIPLDRIS VSMTMNGAVI PILASFIVAG EEQGVSRDKL
SGTIQNDILK EFMVRNTYIY PPEPSMRIVA DIIEYTAKEM PKFNSISISG YHMQEAGATL
VQELAFTLAD GREYVRAALA KGLNVDDFAG RLSFFFAIGM NFFMEAAKLR AARLLWTRIM
KEFKPEKASS LMLRTHCQTS GVSLQEQDPY NNIIRTAFEA MSAVLGGTQS LHTNSFDEAM
ALPTDFSARI ARNTQLILQH ETGVTRVVDP LAGSYYVESL TNELAEKAWA LIEEVEALGG
MTKAVNAGLP KRLIEEAATR RQAAVDRGEE VIVGVNRYRL ENEQPIDILQ IDNAAVRTAQ
IKRIEETRRR RNSQKMKEAL DTLADVARSG KGNLLAAALE AARARATVGE ITDAMREAFG
DYTAVPEVVT DIYGRAFEGD PELGVLAGRL GEVTKRLGHK PKIMVAKLGQ DGHDRGSKVI
ASAFGDIGFD VVAGPLFQTP EEAAELALAE EVTVLGVSSL AAGHKTLMPQ LAEALKERGR
EDIILVCGGV IPRQDYAYLM ENGVSAVFGP GTHVLDAARA ILDLIEGKRR NL
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