| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4148 |
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| Symbol | paaB |
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| ID | 5319144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 621257 |
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| End bp | 621541 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640775953 |
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| Product | phenylacetate-CoA oxygenase subunit PaaB |
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| Protein accession | YP_001312886 |
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| Protein GI | 150376290 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
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| TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.733819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAGCG AATGGCCCCT CTGGGAGGTC TTCATCCGCG GTCAGCACGG CCTCAATCAC
CGCCATGTCG GCAGTCTGCA TGCACCGGAC GCGGAAATGG CGATCAACAA TGCCCGCGAC
GTCTATGTCA GGCGGAACGA GGGCGTCAGC ATCTGGGTGG TGCGTTCAAT CGACATAGTG
GCAAGCGCAC CCTCTGAGAA AGGACCGCTG TTCGAGCCTT CGAACGCAAA GGTCTACCGC
CATCCGACTT TCTTCGACAT TCCTGATGAG GTGGGGCACA TGTGA
|
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| Protein sequence | MSSEWPLWEV FIRGQHGLNH RHVGSLHAPD AEMAINNARD VYVRRNEGVS IWVVRSIDIV
ASAPSEKGPL FEPSNAKVYR HPTFFDIPDE VGHM
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