Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4142 |
Symbol | |
ID | 5319138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 613914 |
End bp | 615041 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775947 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001312880 |
Protein GI | 150376284 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.697509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCG AAGTAGGAAG TACGCTTCCG CTGGCCGTCG AACCCGAGGA AAAGCACCAC CACGAGAGCT ACTCCGCACT CGTATGGCGC CGATTGAAGC GCTCCTGGAC CGGCCTGCTC GGCCTGATCC TCGTCTGCCT GCTGATCCTG ATGGCCGTCT TTGCCGATTT CCTGTCGCCG GTGGATCCGA AGGTGACGGA TGTCGCCTTC GCGCAGCCCC AGACGATCAG TTTCCGCGAC AAGGACGGCA ATTTCGTCTT TCCGCCGCGG AGCTATCCGG TGCGGGAGAC GGAGGAACTC GATCCGATCA CCTTCCAGCC GATCATCGGC CCCGACTACG AAAATCCACA GGTGCTGGGC TTCTTCGTCA AGGGCGCTCC GTACCGGCTC TTCGGGTTGA TCCCGGCCGA GCGCCATCTC TTCGGCGCAG TCGACGGAAC GCCGGTGCAT CTGCTCGGCA CCGACAAATT CGGCCGGGAC GTACTGTCCC GCATTCTCTA CGGCTCGCGC ATCTCGCTGA TGATTGCGCT CACCGTTGTC TTCATCGTCA CAGTGGTCGG CACGACGGTC GGCATGGTTT CCGGCTATTT CGGCGGTCGC TTCGACGCCT GGGTGCAGCG CTTCGTCGAA CTCGTGCTCG CCTTTCCGCA ATTGCCGCTC TATCTGGCGC TCGCCTCGCT GATTCCGGTT ACAGCGCCGA CCAACGTCTT CCTCGCCTTC GTCATCATCG TAATGTCGGC GCTCGGCTGG GCGCAGATGT CGCGCGAGGT GCGCGGCAAG ACCCTGGCGC TTGCCCGGAT CGAATATGTG CGGGCGGCGA TCGCCATCGG CGCGACGGAT CGGCGCATCA TCTTCCAGCA CATCTTCCCG AATGTGATGA GCCACGTCAT CGTCGCCGTG ACGCTCGCCA TTCCGCAGGT GGTGCTGCTT GAATCCTTCC TCGGCTTCCT CGGCTTTGCG GTCAAGCCGC CGCTGATCTC CTGGGGGCTG ATGTTGCAGG ACACGGCCAA TTATTCGGCG ATCGGTTCCT ATCCCTGGAT CCTCTCGCCT GTCGCCTTCG TGCTCGTCAC CGTCTTTGCC TTCAACGCGT TGGGCGACGG CTTGCGCGAC GCAATCGACC CCTATTGA
|
Protein sequence | MTIEVGSTLP LAVEPEEKHH HESYSALVWR RLKRSWTGLL GLILVCLLIL MAVFADFLSP VDPKVTDVAF AQPQTISFRD KDGNFVFPPR SYPVRETEEL DPITFQPIIG PDYENPQVLG FFVKGAPYRL FGLIPAERHL FGAVDGTPVH LLGTDKFGRD VLSRILYGSR ISLMIALTVV FIVTVVGTTV GMVSGYFGGR FDAWVQRFVE LVLAFPQLPL YLALASLIPV TAPTNVFLAF VIIVMSALGW AQMSREVRGK TLALARIEYV RAAIAIGATD RRIIFQHIFP NVMSHVIVAV TLAIPQVVLL ESFLGFLGFA VKPPLISWGL MLQDTANYSA IGSYPWILSP VAFVLVTVFA FNALGDGLRD AIDPY
|
| |