| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4136 |
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| Symbol | |
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| ID | 5319278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 605247 |
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| End bp | 606521 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775941 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001312874 |
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| Protein GI | 150376278 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.518326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTC AGGCGCGTGC CTATCTGCCG CGTATCGCTG CTCTCGCTCT CGCAGGCGCG
AGCTTTCTGG GCGTGTCTGC GGCGCAGGCC AAGGAAATCA CCATCTGGTG CTGGGACCCG
AACTTCAACG TCGCGATCAT GAAGGAGGCG GGCGACCGCT ACACGAAGAC GCATCCAGAC
GTCACCTTCA ACATCGTCGA CTTCGCCAAG CTCGACGTCG AGCAGAAGCT GCAGACCGGC
CTTTCCTCCG GCACCGCCGA CGCGCTTCCC GACATCGTTC TCATCGAGGA TTACGGCGCG
CAGAAATACC TGCAATCCTT TCCGGGCGCC TTTGCGCCGC TCTCCGGCAC CGTCGATTAC
TCCGGTTTCG CCCCCTACAA GGTCGAGCTG ATGACCCTCG ATGGTGAAGT CTACGGAATG
CCCTTCGATT CCGGCGTCAC CGGGCTCTAT TACCGCAAGG ATTATCTCGA AGCCGCAGGC
TTCAAGCCGG AGGACATGCA GGATCTCACC TGGGATCGTT TCATCGAGAT CGGCAAGCAG
GTCGAGGCAA AGACCGGCAA GAAGATGATG GGCCTCGATC CCAACGACGC CGGCCTCGTC
CGCATCATCA TGCAGTCGGC CGGGCAATGG TATTTCGACA AGGAAGGCAA GCCGAACATC
ACCGGCAACG CGGCGCTGAA GGCAGCCCTC GAAACCATCG GCAAGATCAT GCAGGCCAAT
ATCTACAAGC CTGCCAACGG CTGGTCCGAC TGGGTCGGTA CCTTCACCTC CGGCGATGTC
GCGACCGTCG TCACCGGCGT CTGGATCACC GGCACCGTCA AGGCGCAACC GGACCAGTCC
GGCAACTGGG GCGTCGCCCC CATACCGGCG CTCTCTATCG AAGGCGCCAC GCATGCCTCC
AATCTCGGCG GCTCCAGCTG GTACGTGCTC GAAAGCTCCG AGGAGAAGGC AGAAGCGATC
GATTTCCTGA ACGAGATCTA TGCCAAGGAC ATCGATTTCT ATCAGAAGAT ACTCCAGGAT
CGCGGCGCGG TCGGCTCGCT GCTCGCTGCC CGCGGCGGCG CGGCCTACGA GGCCGCAGAC
CCCTTCTTCG GCGGCGAGAA GGTCTGGCAG AACTTCTCCG AATGGCTGGC GAAGGTTCCC
TCGGTCAATT ACGGCATCTT CACCAATGAG GCGGATCTCG CCGTTACCGC GCAGCTCCCA
GCCGTCACCC AGGGAACGCC CGTCGACGAA GTGCTGAAGG CGATCGAGGC CGAGATCGCC
GGCCAGATCC AGTAA
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| Protein sequence | MDIQARAYLP RIAALALAGA SFLGVSAAQA KEITIWCWDP NFNVAIMKEA GDRYTKTHPD
VTFNIVDFAK LDVEQKLQTG LSSGTADALP DIVLIEDYGA QKYLQSFPGA FAPLSGTVDY
SGFAPYKVEL MTLDGEVYGM PFDSGVTGLY YRKDYLEAAG FKPEDMQDLT WDRFIEIGKQ
VEAKTGKKMM GLDPNDAGLV RIIMQSAGQW YFDKEGKPNI TGNAALKAAL ETIGKIMQAN
IYKPANGWSD WVGTFTSGDV ATVVTGVWIT GTVKAQPDQS GNWGVAPIPA LSIEGATHAS
NLGGSSWYVL ESSEEKAEAI DFLNEIYAKD IDFYQKILQD RGAVGSLLAA RGGAAYEAAD
PFFGGEKVWQ NFSEWLAKVP SVNYGIFTNE ADLAVTAQLP AVTQGTPVDE VLKAIEAEIA
GQIQ
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