| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4059 |
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| Symbol | |
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| ID | 5318882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 521724 |
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| End bp | 522362 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640775866 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001312799 |
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| Protein GI | 150376203 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.111025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCATA CGGTGCTGCT CGTCGACGAT CATCCGTTGC TCCTCAGGGG CTTGCAAGAC
ATCATTGCCG CGGCGCCGGA CTTCACCATC GTGGGCGCGA CCGCGAGCGG GGTCGAAGCC
ATCTCACTCA TATCCCGCCT CCAGCCCGAT ATTGCCGTCC TTGACGTGGC CATGCCGGGC
ATGGGCGGAT TGGAGATCCT CAGGGCGCTT CGCGGTACCC ACCGTTTTAC GAGAGTGATT
TTCCTGACCG CCACCATCAG CGGACCTCAG GTCGCGGAAG CGCTGAAGAT GGGCCTCTCC
GGTCTTCTTC TGAAGGAATA TGCGCCGGAA GCGCTGCTGG ACTGCATGCG GCAGGTTGCC
ATGGGCGGAA AGTGGCTTCC CGCCGATCTG ATGGAGAAGG CGTCCCAGGT CAGCGAAGAT
GTGACCCTGG AAAGGTTCAG TCTGCTGACG CCACGCGAAC GTGAGATCGC AGCGCTGATC
TGCGGCGGCC TGTCCAACCG TATGATCGCA TCCAGGCTCG GAACATCCGA GGGAACGATC
GGCATCCACC TGCACAATAT CTTTCGCAAG CTGGACATCA GCAATCGCGC GACGCTTGCC
GCCCTTCACG TTCAGTACAC CAACACTCTG AAAGCCTGA
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| Protein sequence | MMHTVLLVDD HPLLLRGLQD IIAAAPDFTI VGATASGVEA ISLISRLQPD IAVLDVAMPG
MGGLEILRAL RGTHRFTRVI FLTATISGPQ VAEALKMGLS GLLLKEYAPE ALLDCMRQVA
MGGKWLPADL MEKASQVSED VTLERFSLLT PREREIAALI CGGLSNRMIA SRLGTSEGTI
GIHLHNIFRK LDISNRATLA ALHVQYTNTL KA
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