Gene Smed_4031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4031 
Symbol 
ID5318331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp490674 
End bp491405 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID640775839 
ProductGntR domain-containing protein 
Protein accessionYP_001312772 
Protein GI150376176 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAGA AGCCGCTCAT TCTCGAAAGC CTAGCGGAAG CCCGCCCTTC GAGCTATGCC 
GATCAGGTCT ATGGGCGCAT CCTGCACGAC ATATTGAATG GAGTTTTTCA ACCGGGCGCG
CGGCTGCCGA CCGAGAACGA GTTGGCCGAA CGTTTCGGCG TTTCGCGGCC GGTCGTCCGG
GAAGCACTGG CGCGTCTGAG AGTCGACGGC CTTGTTGAAG CGCGGCGCGG CAGCGGCACC
TATGTCCTCA GCCGGCCTTC GCAAACTCTT CCGGAACTCG CCGACCTGGA GGATATCTCG
CGCTTCCTTC GATATCAGGA GCTCCGCTTC CATGTGGAAG GCCAGGCGGC CGCACTGGCT
GCGGAGCGGC GCACGGAAAA GCAGCTTGCC GCCATCGTCG AAGCCCATGA AACCTTCGCC
CATGAGGTCG GCAGAGGGGC TTTCCTGCCT GAAAGCGACA GGCGTTTCCA TCTTGCGATC
TGCGAAGCAA CCGGAAACGA ATTCTTCGCC AAGGCGCTGG AGGGGCCGGA GGTCTCGCTG
ACGAGTTTCA TGAATGTCTC GCTGGCGCTC ACCCGTTCCG GCTCGCAGGC ACGCGCCCGC
CGGGTCATCG CCGAACATGC CGAGATTGTC GAAGCGATCC GCACGAAAGA TGCCGCATGG
GCGCGTGTGG CGATGGAGAC GCATATCATC AAAGCGCGCC GACGGATGAC GGACGGAACA
ATCGACTCCT GA
 
Protein sequence
MPEKPLILES LAEARPSSYA DQVYGRILHD ILNGVFQPGA RLPTENELAE RFGVSRPVVR 
EALARLRVDG LVEARRGSGT YVLSRPSQTL PELADLEDIS RFLRYQELRF HVEGQAAALA
AERRTEKQLA AIVEAHETFA HEVGRGAFLP ESDRRFHLAI CEATGNEFFA KALEGPEVSL
TSFMNVSLAL TRSGSQARAR RVIAEHAEIV EAIRTKDAAW ARVAMETHII KARRRMTDGT
IDS