| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4026 |
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| Symbol | |
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| ID | 5318326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 484435 |
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| End bp | 486075 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775834 |
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| Product | ABC transporter related |
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| Protein accession | YP_001312767 |
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| Protein GI | 150376171 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.393631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.697509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA CACATCTTCT CGAGGTCAAG GACCTGACCG TCGATTTCCT GTCGCTTGGC
GGATCCTTCC GCGCGACAAA CGGCGTCAGC TTCCATGTCG ATGCCGGAGA GACGCTCGTG
ATCCTGGGCG AGTCCGGTTC CGGCAAATCG GTAAGCGCCA GTGCGATCAT GGGACTCATC
GACACGCCTC CCGGCGACAT CTGCGCGGGG TCGGTCGCCT ATCGCGGCCG CGATCTCTCC
TCGCTTTCGG AAGGTGAGCG GCGGGACCTC AACGGCCGCA AGATCGCGAT GATCTTCCAG
GACCCGCTTT CGCATCTGAA CCCGGTCTAT ACGATCGGCT GGCAGATGGA GGAGGTGTTC
AGCGTCCACG GAGTGGCGAG CGGTGGCGTG GCGCGGCAGA GGGCGATCGA TATATTGAGG
CGCGTCGGCA TCCCGGAGCC GGAGAAGCGC ATCGACCAGT ATCCGCACCA ATTCTCCGGC
GGCCAGCGCC AGCGCATCAT GATCGGCATG GCAATCGCGC TCAGGCCGGA AATCCTGATC
GCCGACGAGC CGACGACAGC GCTCGACGTG AGCGTGCAGG CCCAGATTCT CGAGCTTCTG
AAGAAGCTGC AGGCGGAGGA CGGCCTTGCC ATCATCATGA TCACCCACGA CCTCGAGGTG
GCCGCGAACA TGGCCGACAG GGTGATCGTC ATGAAATCCG GCCGCATCGT GGAAGAGGGC
GAGGCCCGTG CGGTCTTCGA AAACCCCGCC CATACCTATA CGCGGACGCT GATCAACGCG
CTACCGCATG GCGATCACGA AGCCCCGCCG AAACGCGGAA GGCCCGCTGG AAAGCCGATC
CTGGAAGTAA GGAACATCGA CAAGTTCTAC ACTCTCTCCT CCGGGTTTTT CGCGAAACCG
GCGCGGTTGC ACGCGGTCAA GAAGTTGAGC TTCGACGTTG CGGCAGGGGA GACCATCGGC
ATAGTTGGCG AGAGCGGCTC CGGCAAGTCC ACCGTCGCGC GCGTGCTTCT GGGTCTCAAC
GAAGCGTCCG GCGGAGAGGC GCTGTTCCAC GGGCGCGATA TCCTGAAGAT GGACCGCAAG
GAATTGCTGG CCTTCCGCCG GAAGGTGCAG ATGGTTTTTC AGGATCCCTA CAGCTCGATG
AACCCGCGCA TGACGGTGCT CGATATCGTT TCGGAGCCGT GGCGCATCCA CAAGGATATT
CTGGAGAAGC CCCGTTGGCG CGACCGCGTT ACTGAATTGC TGGGGCTCGT CGGCCTGAAC
CCCGAGCATG CCGCACGCTA TCCTCATCAG TTCTCAGGGG GGCAGCGGCA GCGCATCGCC
ATTGCCCGGG CGCTTGCCTG CGATCCGGAG CTCGTCGTGT GCGACGAGGC CGTGTCGGCG
CTCGACGTCT CGGTGCAGGT GCAGGTGATC GGCCTCTTGG CGGAATTGCG CGACCGGCTG
GGCCTCGCCT ACATTTTCAT AACCCATGAC CTGCCGATCG TGCGTCACTT CGCCGACCGG
ATCATCGTCA TGAAGAGCGG CGAGATCGTC GAGCATGCGA CGACGGAAGA GATCTTCCGC
AGTCCGCAGC ATGCCTATAC GCGCCAGCTC ATCAATGCGA CGCCGAAGCC GAAGTGGCAG
ACAGCCGCCG ACGCGGCATG A
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| Protein sequence | MTGTHLLEVK DLTVDFLSLG GSFRATNGVS FHVDAGETLV ILGESGSGKS VSASAIMGLI
DTPPGDICAG SVAYRGRDLS SLSEGERRDL NGRKIAMIFQ DPLSHLNPVY TIGWQMEEVF
SVHGVASGGV ARQRAIDILR RVGIPEPEKR IDQYPHQFSG GQRQRIMIGM AIALRPEILI
ADEPTTALDV SVQAQILELL KKLQAEDGLA IIMITHDLEV AANMADRVIV MKSGRIVEEG
EARAVFENPA HTYTRTLINA LPHGDHEAPP KRGRPAGKPI LEVRNIDKFY TLSSGFFAKP
ARLHAVKKLS FDVAAGETIG IVGESGSGKS TVARVLLGLN EASGGEALFH GRDILKMDRK
ELLAFRRKVQ MVFQDPYSSM NPRMTVLDIV SEPWRIHKDI LEKPRWRDRV TELLGLVGLN
PEHAARYPHQ FSGGQRQRIA IARALACDPE LVVCDEAVSA LDVSVQVQVI GLLAELRDRL
GLAYIFITHD LPIVRHFADR IIVMKSGEIV EHATTEEIFR SPQHAYTRQL INATPKPKWQ
TAADAA
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