Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4012 |
Symbol | |
ID | 5318292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 468423 |
End bp | 469319 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775820 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001312753 |
Protein GI | 150376157 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTGA CACTTCGCCA GTTGCAGGCA TTTATTGCCG TGGCCGAACT CGGGCGTTTC CATCTGGCGG CGGATCACCT CGGACTTACG CAATCGGCGA TCAGCATTCT GATCAGAGAT CTGGAAGCCG TCCTCAAGCA CCGCTTATTC GACCGGCACA CGCGCATGGT CAGCCTTACG ACGGCCGGAG CGGAGTTTCT GCCGCAGGCC CGCAAGATCA TGTCGGACCT CGAGATCGCA GTCACGAACG TCCACGAGCT GGCGAACCTG CAGCGCGGCC GGGTTACCAT TGCGGCTGCG ATCGTGCTCG CTGCGACCTT GCTGCCTCCG GTCATCGCGC GGTTCGTCAA GCGATATCCC GACATACAGG TGCAGGTACG GGACATGCCG GAGGAGGAGA TCCGGTCGGC GTTGAAACGA AACGAGGCGG ACCTGGGCAT CGGCACCGTT TCCGCCGACG ACCCGGAGAT TCAGGCCAGC GTGCTCATGC GTGACCAACT CACACTGATT TGCCGCTCCG ACCATCGCTT CGCAAGGGCG CCGCAGGTGA GCTGGGCGAA TCTTGCCGGC GAGGCTCTGA TCGGTCTTGC AAAGGACAAC CCCTTGCGCG GACTCGTCGA TCACGCGCTG ATCGCCTCCG GAGTCGAGGT GAAGACGAGA TACGAGGTGC GGTTCTCAAC GACGGCGATC AGCATGGTGG CGGAAGGCCT TGGCATAGCG ATCCTTCCGG AAAACTCACG TCAACTCACC ACGAATGTGG ACGTGCGGAT CGTCGACCTC GTCGATCCCG TCATCAGCCG CAACATCTCC ATTCTGCAGT ACCGGCAACC GATGCTCTCG CCGGCGGCGG CGAAGATGAA GGAGTTTCTT ATGGGAGCGA GCCGCAAGCC CTCGTGA
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Protein sequence | MNVTLRQLQA FIAVAELGRF HLAADHLGLT QSAISILIRD LEAVLKHRLF DRHTRMVSLT TAGAEFLPQA RKIMSDLEIA VTNVHELANL QRGRVTIAAA IVLAATLLPP VIARFVKRYP DIQVQVRDMP EEEIRSALKR NEADLGIGTV SADDPEIQAS VLMRDQLTLI CRSDHRFARA PQVSWANLAG EALIGLAKDN PLRGLVDHAL IASGVEVKTR YEVRFSTTAI SMVAEGLGIA ILPENSRQLT TNVDVRIVDL VDPVISRNIS ILQYRQPMLS PAAAKMKEFL MGASRKPS
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