| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3994 |
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| Symbol | |
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| ID | 5319241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 447776 |
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| End bp | 448453 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775802 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001312735 |
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| Protein GI | 150376139 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.75286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAG AAGAGTTTGC CGAAGACGAG GACGACCAGG AAGCGGCATC AGGCCGCTCC
GGGAAACGGG ACGCCCGTCG CGAAGAGTTT CTGCGCGCAG CCACGGAGGT GTTCCTGAGT
TCGGGCTTTT CCGGTGCGAG CGTCGACTCG ATCATCGCGA AGGCGGGTGG TTCGAAGCGG
ACCATCTACA GCTATTTCGG CAAGAAAGAT CAGCTGTTTA CGACAGTCAT AAAGGAGATC
ACCGGCCGGG TAATGGGCCC ATTCCCCGCC GCGAACATTG CCGGTGCCGA CCTCGATACG
GTGCTTTACA GGAGCGGAAG CCATTACCTC GACGCAGTCA TGTCACCGGA AGCCCTGCAG
CTCTACCGTA TAGTCGTCGG CGAAGGCGCG CGGTTTCCTG GCGTGGCGCG CGCTTTCTTC
GAGAACGGTC CCGGCAGGGC CAGTGCAGCT CTTGCAAGTA TCCTCGAGGA AGGGGCGGAC
AACTGGGGAA TACCAAAGCG TTCCGCGGCG AAACTGGCGG AGCACTTCAT AGGCATGATC
CGCGACGACC TGCACCTGAA GGTCGTGCTT GGGCTTTGCG ATCCGCCGAC GCCTGCGGAA
GCTCGCTCGT CGGTTCGCGA TGCCGTCGAC GTTTTTGTGT ACGGCATCCG GAAGACCGAG
CTGACGAGGT CACGATGA
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| Protein sequence | MAEEEFAEDE DDQEAASGRS GKRDARREEF LRAATEVFLS SGFSGASVDS IIAKAGGSKR
TIYSYFGKKD QLFTTVIKEI TGRVMGPFPA ANIAGADLDT VLYRSGSHYL DAVMSPEALQ
LYRIVVGEGA RFPGVARAFF ENGPGRASAA LASILEEGAD NWGIPKRSAA KLAEHFIGMI
RDDLHLKVVL GLCDPPTPAE ARSSVRDAVD VFVYGIRKTE LTRSR
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