Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3953 |
Symbol | |
ID | 5318061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 403199 |
End bp | 404368 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775763 |
Product | hypothetical protein |
Protein accession | YP_001312696 |
Protein GI | 150376100 |
COG category | [S] Function unknown |
COG ID | [COG3287] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCTG TCGATGATCT TGAGCGCAAA CCGGCGGAGG CGGTGCGGCT TGCGACATCA CGCGCCGAGG ATGCGTTCAC TGCCCTTGCC GACATCAGGC GGCAGCTCGC CACGGCAAGG CCAAGTTTCA TTTTTCTGTT CGTGCCGAAC AGGCTGCAAA CGGACGACCT CGCCGCGGCG CTTAGAAAGT CGTTGCCGAA CACGGTCGTC TTCGGCTGCA CGACGGCGGG CCAGATTACG CCTCGTGGCT ATGAAAACGA CGCCCTGCTG GCGGTTGCCT TCCAACGGCA TCATTTTCGG GTAGCCTCGA TCCTGTTCCA GCCGATTTCT CCGGTTTCGA TTGCCGATGT CGTGTCGCAG ACGGAGCGGC TCGCCTCGCA GTTCCGCGTT ACGCCGGGCC GAAAGCGGTT GGCGCTGATC TTTGCCGACG GACTGTCCAA GCAGGAGGAT GTTCTGGTGG CAGCGCTCGA GGCGGGGCTG AAGGATATCC CGGTTTTCGG CGGTTCGGCC GGCGACGGGC TGCGGTTCCA GCGCACACAG GTACTCCGCA ACGGTGAATT TCACAGCAAT GCGGCGCTTC TCCTGCTGCT CGAAACCGAC CTGGAGTTCA GCGGCCTCGG CTTCGACCAC TTCCAGCCGA CCGACAAGCG CATGGTGGTG ACCCGCGCCG TTCCGGAGGA ACGGCTGGTT CTGGAAATCA ACGGCTCTCC GGCGGCGGAG GAATATGCCC GGCTCGTCAA GGTACCGGTC GACGAGTTGT CACCGATGGT CTTTGCGGAG AACCCGGTGC TGGTGCGCAA CGGCAATCTC TATCACGTAC GGGCCATACA GCAGATACAC GGCGAGCATG GCCTCACCTT CCTATCGGCG ATAGACGATG GTCTCCTGCT GCGGCTGGGT CGCGGCAAGG AGATCATCCG CACGCTCGAG ACGGGGCTGG CGGTCAACGG CCATGACGGC GAAGCGCCCG ACTTCATACT GGGATTCGAT TGCTATCTGC GCAAGCTCGA GATCGAGCGG AAGGGCCTGG ACAGCGAGGT TTCCCAGCAA TTGCGGCAGA ACCGCGTCGT CGGCTTCAAC ACCTATGGCG AGCAGCATCT CGGCGTCCAC GTGAATCAGA CCTTCGTCGG CGTCGCGTTT TTCCGGCCAA AGGAGGGCGC GCCGCTATGA
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Protein sequence | MTAVDDLERK PAEAVRLATS RAEDAFTALA DIRRQLATAR PSFIFLFVPN RLQTDDLAAA LRKSLPNTVV FGCTTAGQIT PRGYENDALL AVAFQRHHFR VASILFQPIS PVSIADVVSQ TERLASQFRV TPGRKRLALI FADGLSKQED VLVAALEAGL KDIPVFGGSA GDGLRFQRTQ VLRNGEFHSN AALLLLLETD LEFSGLGFDH FQPTDKRMVV TRAVPEERLV LEINGSPAAE EYARLVKVPV DELSPMVFAE NPVLVRNGNL YHVRAIQQIH GEHGLTFLSA IDDGLLLRLG RGKEIIRTLE TGLAVNGHDG EAPDFILGFD CYLRKLEIER KGLDSEVSQQ LRQNRVVGFN TYGEQHLGVH VNQTFVGVAF FRPKEGAPL
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