Gene Smed_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3947 
Symbol 
ID5318055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp397000 
End bp397638 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID640775757 
Producthypothetical protein 
Protein accessionYP_001312690 
Protein GI150376094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0213585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCG CCTGTCATGC GTTTGGTCCA ATGCGCCGCC TGGCGTTTGG TTTGACGGTC 
GGTCTGGCGC TTGGCCTGAC ACAAGCCCCC GGCAATTCAG TTGCCATGGA CTTTTCCGAT
CCGGACTGGC CCTGCATCCA GCGCAAGGTC GAGAAACTAT CCGCGAGCCT GATGTGGCCA
GCGCCTGTCA CCACCGCTCC GCTCTCAGCC GAGGCAACCG AGCTCGTCGA AATGCTATCG
CTTCGGCGGG TCAGCCTGGA AGAGGCCGAT GCGCATGTCC GCGCCTTTGT GGAGCGGGCC
AAGGTCGACG GCAATGTGCT CGGCAATGTT TTTTACGGCG TGTTCGAAAA TATCGCCGAG
ACCCGACAGC GACTGATCAC GGGGATAGGT CGCTACTCCC GGAGCCAGAT CGCACTCTCA
TCCCGAATCG ACAGTGCCCG CGTCGAAATG GCGAAGCTTT CGAAAGTGGA AAGTCCCGAT
TTCGACCGCA TAGACAAGCT GGAGGAGCAG ATCGACTGGG ACGAGCGCAT CTATCGCGAT
CGCTCGCAGG CGCTTACATA TGTGTGCGAA ACGCCGGTGC TTCTGGAAAA GCGCGCCTAT
GCCATTGCAC AGATCCTGCT CAAGCATATG CCGGATTGA
 
Protein sequence
MRVACHAFGP MRRLAFGLTV GLALGLTQAP GNSVAMDFSD PDWPCIQRKV EKLSASLMWP 
APVTTAPLSA EATELVEMLS LRRVSLEEAD AHVRAFVERA KVDGNVLGNV FYGVFENIAE
TRQRLITGIG RYSRSQIALS SRIDSARVEM AKLSKVESPD FDRIDKLEEQ IDWDERIYRD
RSQALTYVCE TPVLLEKRAY AIAQILLKHM PD