| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3821 |
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| Symbol | |
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| ID | 5318013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 275504 |
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| End bp | 276505 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640775633 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001312566 |
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| Protein GI | 150375970 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTCT ACAAGAAGAT TGCTACCTGC ACGGTCGCTT TGGGTGCGCT TTGCGCTGCC
CAGATTGCCG TCGCGCAGGA TGCGCCCCCG GTCGTGACGG TCGTCAAGGT GACCGGCGAA
AACTGGTTCA CGCGCATGGA GGAAGGCGTT GTTGCCTACG GCAAGGACAA TACGGGCGTT
TCGACGAGCC AGATCGGTCC CGCCAAGGCG GACGCCGCCC AGCAGCTGCG CCTCATAGAA
GACCTCGTCG CGAAGAATGT CAGCGCCATC GCTGTCGTGC CGATGGACCC CTCTGCTCTC
GAAGGCGTCT TCAAGCGCGC GATGAACCGC GGCATCAAGA TCGTCACGCA CGAAGCCGAC
AGCTTGAAGA ATACGCAGGT CGATATCGAA GCCTTCGACA ACAAGGTCTT CGGCGCGCGC
TTCAACGAGA AACTGGCCGA GTGCATGGGC AAGTCCGGCA AGTGGACGTC ATTCGTCGGG
TCGCTCGGCA GCCTGACGCA CGTACAATGG GCTGACGGCG GCGCGGAGAA CGCCAAGAAA
TATCCGGAAA TGGAACTCGT CTCCGAGAAG AACGAGTCCT TCAACGACGC CAACAAGGCC
TACGAAAAGG CGCGCGAGAT CCTTCGCAAG TATCCTGACA TCAAAGGCTT CCAGGGCGGT
TCGGCCATTG ACGTCATCGG AATCGGCCGC GCCGTCGAGG AAGCCGGCCT TGTGGGGAAG
GTTTGCGTCG TCGGCCTCGG GCTGCCGAAG GACACCGCCA AGTACCTCGA ATCCGGTGCG
GTCCAGAGCA TTTCCTTCTG GGACCCGAAG GATGCGGGTT ATGTGATGAA CAAGGTTGCT
CAGCTCGTGA TCGAGGGCAA GGAAATCACC GATGGTATGG ATCTCGGAGT CCCGGGCTAC
AACAAGGTGT CCGTGAAGCA GGGTCCCGGC GAAGGCATCA TCGTCGTCGG CGAAGCCTGG
GTTGACGTCG ATAAGTCCAA CTACAGCCAG TATCCGTTCT GA
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| Protein sequence | MSVYKKIATC TVALGALCAA QIAVAQDAPP VVTVVKVTGE NWFTRMEEGV VAYGKDNTGV
STSQIGPAKA DAAQQLRLIE DLVAKNVSAI AVVPMDPSAL EGVFKRAMNR GIKIVTHEAD
SLKNTQVDIE AFDNKVFGAR FNEKLAECMG KSGKWTSFVG SLGSLTHVQW ADGGAENAKK
YPEMELVSEK NESFNDANKA YEKAREILRK YPDIKGFQGG SAIDVIGIGR AVEEAGLVGK
VCVVGLGLPK DTAKYLESGA VQSISFWDPK DAGYVMNKVA QLVIEGKEIT DGMDLGVPGY
NKVSVKQGPG EGIIVVGEAW VDVDKSNYSQ YPF
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