Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3814 |
Symbol | |
ID | 5318368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 267768 |
End bp | 268457 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775626 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001312559 |
Protein GI | 150375963 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCAC ATCTGAAACA TCGCACCCTC TCAGGCGCAC TCATCGAGGA AATACGGCAG GCGATCCTGT CGGGCCGATA CCCGGCCGGC AGTCAATTGC GCCAGGATGC GCTGGCTGAA ACCTATGGCG TCAGCCGCAT TCCCGTGCGC GAGGTTCTCT TTCAACTCGA GGCTGAAGGT CTGGTCAGGA TCGTGCCGCA GAAGGGAGCC ATCGTCTCCG AACTGTCGCT TGCCGAAATC GACGATGTCT TCGAACTGCG CGCTCTCCTC GAACCGCGGC TCCTGCGAAA ATCGGCGCCT CTTCTCGACG GCGACGATTT TGCGCGCCTG GACGAGGCTC AGAACCGCTT TCTTAAAGCC ACGACGGCGG GCGAAATTGA TTCATACGGT CAGCTCAATG CCGAACTGCA CATGGTACTG TACCGGCGTG CCGACATGCC GCGAACGCAG CAGATCGTCG CCTCGCTGCT ACAGACGAGC GACCGTTACA CGCGCGTCCA GCTATCGAGC GTCGCAGCGA TGACCCGGGC GATGGAAGAA CATGCCGAGC TGATCCGCCT TTGCCGGGCA GGCGCCTTCG AAGAGGCGTC CGCTTTCCTG GTTTTCCACC TCAAGGCAGT CCACGAAGAC CTGCTGTTCC GGCTGAACGG TCGCGAGGAT GCCCCGGCGA TGGAGGGTGG AGCAGGATGA
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Protein sequence | MASHLKHRTL SGALIEEIRQ AILSGRYPAG SQLRQDALAE TYGVSRIPVR EVLFQLEAEG LVRIVPQKGA IVSELSLAEI DDVFELRALL EPRLLRKSAP LLDGDDFARL DEAQNRFLKA TTAGEIDSYG QLNAELHMVL YRRADMPRTQ QIVASLLQTS DRYTRVQLSS VAAMTRAMEE HAELIRLCRA GAFEEASAFL VFHLKAVHED LLFRLNGRED APAMEGGAG
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