| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3804 |
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| Symbol | |
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| ID | 5318102 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 254944 |
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| End bp | 256912 |
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| Gene Length | 1969 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | 640743263 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCCAGC GTTTCACAGT GAATTTTCCG GTATTCGCCG GGTCGGTGAC CGTCATCGCC
CTTTTCGGCG CAATCGGGGT GGTTGCGCCC AAGAGAGCTG AATCCATTTT CAGCGGGATC
CAGGCGACGA TCCTCTCCGG TTTCGGCTGG CTCTATCTGC TCGCAGTGGC CATCTTCCTG
TTTTCGATGA TTTTCATGGC ATTTAGCCGC TATAACGAAT TGAAGCTCGG GCCGGAGGAT
TCCGAACCCG AGTTCCGCTA CCTGTCCTGG ATCGCCATGC TGTTCGCCGC CGGCATGGGC
ATCGGGCTCA TGTACTTTGC CGTCGGCGAG CCGATGACGC ATTTCGCCTC TCCACCCGAG
GCCGAACCCT TGACCATCGC TGCCCAGCGT GAGGCGATGA GCGTAACCTT CTTCCATTGG
GGCGTACACG CCTGGGCAAT ATATTCAGTG GTCGGACTGT CCCTGGCCTA TTTCGGTTAC
CGCTACAATC TACCCCTCAC GGTCCGATCG GGGCTTTAGC CGCTGCTCAA GGAGCGCATT
CACGGGCCTA TCCGGCATAT CGTGGATGTC TTTGCGATCT GCGGGACCTT GTTCGGGCTT
GCGACCTCGC TCTGATCCGG TGTCCTTCAG ATAACTTCGG GCCCGAACTA CCTGCTGGGC
GTCCCCCAAT CGATATATGT CCAGCTTCTG CTCGTCACCA CCGTCACGGC AATAGCGACT
ATCTCGGTCG TTACCGGCGT CGACAAGGGC GTCCGCATTC TCAGCGAGGT GAACCTCTTT
CTCGCGGTGA TGCTGATGAT TTTCGTGCTC GTGGTCGGGC CGACCGCTAC GCTGATGCGA
GATCTCGTCC AGAATATCGG CCTCTATCTC GACAGCCTGC TCTTGCGGAC GTTCAACATC
TATGCCTACG AACCGCGCCC GTGGATCGAT ACTACTGGGC CTGGTGGATT TCCTGGTCGC
CCTTCGTCGG CATGTTCATC GCGCGGATAT CCCGCGGACG TACTGTGAGA GAGTTCGTCA
CCGCCGTTCT CTTCGTACCG GCCATTTTCA CGTTCCTGTG GATGACCGTT TTCGGAAACA
CGGCGATTTA CGTCGACACG ACGATCGCCA ACGGCGAGCT GGCATGTGCC GTGAAGGCGG
ACCTATCGAT CGCCCTTTTT CAGTTCTTCG AATATCTGCC ATTGTCGGCG GTGACCTCGA
CACTCGCGGT TCTGCTCGTC AGCATATTCT TCGTCACCTC CTCCGATTCC GGCGCCTTGG
TGATCGATAC GATAGCGGCG GGCGGCAAAA CGGCCACTCC CGCCCTTCAG CGGGTTTTCT
GGTGTGCCCT CAGCGGCATC GTGGCCGCCG TTCTGTTGTC CACCGGAGGG CTTACGGCCC
TGCAATCCGC CACCATCTCC ACGGCACTGC CATTCAGCCT GGTGATGCTC GTACTTGTAC
GGTCGCTGTT CGTCGGGATG AGGGCCGATC TTGCCCGCAC ACGCTCGCCC GGTTCAGTCG
GGCACGGGCC TATCCCGCGT CCGGCGTAAC ATGGCAACGC CGCCTGGCGA TGACGCTCAG
CACCCCGGAC AAGCCGGCCG TGGAGTCGTT CATGCAGGCT TCCGTCCTTC CGCCCCTCGA
AGCGGTGGCC AGGGAGCTGA CGTACCGCTC GCGGCCGGCT TCCGTTGCCC GCGATGCCCG
AACGGGAACA CTGACGCTCA CGGCGCCTGC AGAAAGCCAC CGCGATTTCG TCTATGGGGT
TCAGATGTCC GAACACAAGC TTCCCGCCTT CACCGCATTG GAGGCGACCA ACGCCGATGT
GCGTTACGAG GCGCGAACCT TCTTTTCGGA TGGCAGTCGC GGCTATGACA TCATGGGAAT
GACGGACGGC CAGATCATCA ACGACGTTCT GTTCCAGTTC GAACGATACA CAGGCTTCGT
GCGGTCTCCC GAGGCCTCGC TGTTGGCGGC CTCACCCGAA CAGCAATAG
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| Protein sequence | |
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