Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3803 |
Symbol | |
ID | 5318101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 253480 |
End bp | 254823 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640775616 |
Product | hypothetical protein |
Protein accession | YP_001312549 |
Protein GI | 150375953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.853464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCG CGGCCCCCCG TTTGTACCGT CTTCTTGCAG TCCTGTTCTG CTGGCTTTCG ACCCAAGGCC CGGCACTCTC CGCCGATCCG CTCGCCCGGG CAGCGCTGCA GTCGCAGGGA ACGCTCTATG CCGGCCAGCA AATCCTTGTA GACGTCGACG TCCTCGTCCC GAACTACTTC CTGCAATCGC CTCAATTCCC CGCAATCGAT ATTCCAGGCG CGATAGTGAC GCTTGACGAC GGAAGGGCAC TGAACCTCAA CGAAACGATC GACGGAACGC CCTATTCCGG CATTCGGCGC ACCTACATAA TAGTACCGCA GGCGGCCGGC GATTTTACCT TGCCCCCCGT CCCGATCACC TTCGGCTATG CAGCGGTCCC CCCTCAGGCC ACCCGGGGCG AGGTCACGTT TCCGCCGCTT CGCTTCACAG TTCGAAGCGC GCCGGGCACC GCCGGCGATA GTCCCGGTAT CGTTGCGGCA AAAGTCAGCG TCAGCCAGGA ACTGGATCAG GATCCGGCGC AGTTGAAGGC TGGCGATACG ATGGTTCGCA CGGTCACGGT GCGGGCCGAA GGGCTTCGCG CCATGATGAT CCCCGAACCG GACTTTACGG CTCCTCAGGG TGTCCGCCTC TACCGGCAGG ATCCTTCACT TTCGGAAGAG ACGGACCGCA ACGGCCAGTC GATCGCGGGC CTCCGCAAGG ACGTTGCAAG CTATCTCTTC CAAGACGCCG GCAATTATGT TCTGCCTGCC GTGACCGTTA GCTGGTTCGA CCCGGCTTCG GCGAAGACCC AGTCGGCCAC GGCTCCCGCG GTCAGCGTGA CGGTTTCAGC GGCGGCCGCC CTCTCCCCTG CTCTTGCGCC CCCCGCGCCG GAGCCGCAAC GCGATGCCTT CGACTGGCTG CACCTGGCTC TGATCGGGGG GATCGTGCTT CTCACCGCCT CCTCGCTTTG GGTTGCCGCC AACGGATTGT CCCGGCTGGA AGCCTGGTGG CAAGAGCGCC GCTCGAGAGA GCGGCAGTCG GAGCCGGCTT TTTTCCGGCA AGTGGAGCAG GCGTGCAAAA GCGGCCGAGA CGACGCGATC GCGCGCGCGC TCGACGCTTG GTCGCGCAAA GCGGGAGCGA TGCCGCTCGA ACTTTGGCTT GGGCGCTTCG CGGATGCCGA GACCAAGCAG GTTTACCAGG CCTGGCAGAG AACGCGTTAC GCTTCTCAGC AAGCATCCCA GCCGTTAGGA GCAGGCTTGC TTCTGCCCGG CCTGAAGAAG GCTCGGGAAG CCTGGTTGAT GCAGGAAACG GAAGCGCCCG GCCGCAAGCC GGCCTTGCTT CCCCTCAACC CGACTATGCC GTGA
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Protein sequence | MTIAAPRLYR LLAVLFCWLS TQGPALSADP LARAALQSQG TLYAGQQILV DVDVLVPNYF LQSPQFPAID IPGAIVTLDD GRALNLNETI DGTPYSGIRR TYIIVPQAAG DFTLPPVPIT FGYAAVPPQA TRGEVTFPPL RFTVRSAPGT AGDSPGIVAA KVSVSQELDQ DPAQLKAGDT MVRTVTVRAE GLRAMMIPEP DFTAPQGVRL YRQDPSLSEE TDRNGQSIAG LRKDVASYLF QDAGNYVLPA VTVSWFDPAS AKTQSATAPA VSVTVSAAAA LSPALAPPAP EPQRDAFDWL HLALIGGIVL LTASSLWVAA NGLSRLEAWW QERRSRERQS EPAFFRQVEQ ACKSGRDDAI ARALDAWSRK AGAMPLELWL GRFADAETKQ VYQAWQRTRY ASQQASQPLG AGLLLPGLKK AREAWLMQET EAPGRKPALL PLNPTMP
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