Gene Smed_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3794 
Symbol 
ID5317995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp243421 
End bp244068 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID640775607 
Productresponse regulator receiver protein 
Protein accessionYP_001312540 
Protein GI150375944 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAA GCGTTGGTAG AGTATTGCTG CTGGATGATG ACGAGCTCGT GCTGCGGTCT 
CTGAAGAGAC TGCTTTCGGC TTCGGGATAC TTGGTAGGTA CGTATCAGAG CGCCAGCGAG
CTGCTTGCTT GCGACGATCT CGACACAGCC GATTGCATCA TTCTGGACCT CGGGCTGCCG
GACTCCGACG GTTTCCACGT GCAGGAGGCA CTCGCTGCAG CAGGCGGGAG CCAATCGATC
GTCTTTCTTA CGGGTAAGGG GGATATTCCG GCGAGCGTCA GGGCGATGAA GGCAGGTGCC
GTGGACTTCC TGACGAAACC AGTCGAGGCC GCCGCTCTGC TCGAAGCCGT GGACGTGGCG
CTCCAGCGTG CACGTTCGCG TCGGGAGACC GAAGAGAAGA AGGCGAATGT GGCGATGCGG
ATCGACCGGC TGACGGCCCG TGAGACGCAG GTCATGCATC TCGTCGTCTC CGGCCTCCTG
AACAAGCAGA TAGCCGCCGA TCTCGGGACG GTGGAAAAGA CGATCAAGGT TCACCGTGGC
CGCATGATGT CGAAACTGGG CGTGCGGACG GTTGCCGACC TCGTGCGCCT CGTGTCCGGC
GCAGAAACGA TGCATGGCGG CATTGGGCCC AAGTCCAACT ACGATTAG
 
Protein sequence
MRESVGRVLL LDDDELVLRS LKRLLSASGY LVGTYQSASE LLACDDLDTA DCIILDLGLP 
DSDGFHVQEA LAAAGGSQSI VFLTGKGDIP ASVRAMKAGA VDFLTKPVEA AALLEAVDVA
LQRARSRRET EEKKANVAMR IDRLTARETQ VMHLVVSGLL NKQIAADLGT VEKTIKVHRG
RMMSKLGVRT VADLVRLVSG AETMHGGIGP KSNYD