Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3794 |
Symbol | |
ID | 5317995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 243421 |
End bp | 244068 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775607 |
Product | response regulator receiver protein |
Protein accession | YP_001312540 |
Protein GI | 150375944 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGAAA GCGTTGGTAG AGTATTGCTG CTGGATGATG ACGAGCTCGT GCTGCGGTCT CTGAAGAGAC TGCTTTCGGC TTCGGGATAC TTGGTAGGTA CGTATCAGAG CGCCAGCGAG CTGCTTGCTT GCGACGATCT CGACACAGCC GATTGCATCA TTCTGGACCT CGGGCTGCCG GACTCCGACG GTTTCCACGT GCAGGAGGCA CTCGCTGCAG CAGGCGGGAG CCAATCGATC GTCTTTCTTA CGGGTAAGGG GGATATTCCG GCGAGCGTCA GGGCGATGAA GGCAGGTGCC GTGGACTTCC TGACGAAACC AGTCGAGGCC GCCGCTCTGC TCGAAGCCGT GGACGTGGCG CTCCAGCGTG CACGTTCGCG TCGGGAGACC GAAGAGAAGA AGGCGAATGT GGCGATGCGG ATCGACCGGC TGACGGCCCG TGAGACGCAG GTCATGCATC TCGTCGTCTC CGGCCTCCTG AACAAGCAGA TAGCCGCCGA TCTCGGGACG GTGGAAAAGA CGATCAAGGT TCACCGTGGC CGCATGATGT CGAAACTGGG CGTGCGGACG GTTGCCGACC TCGTGCGCCT CGTGTCCGGC GCAGAAACGA TGCATGGCGG CATTGGGCCC AAGTCCAACT ACGATTAG
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Protein sequence | MRESVGRVLL LDDDELVLRS LKRLLSASGY LVGTYQSASE LLACDDLDTA DCIILDLGLP DSDGFHVQEA LAAAGGSQSI VFLTGKGDIP ASVRAMKAGA VDFLTKPVEA AALLEAVDVA LQRARSRRET EEKKANVAMR IDRLTARETQ VMHLVVSGLL NKQIAADLGT VEKTIKVHRG RMMSKLGVRT VADLVRLVSG AETMHGGIGP KSNYD
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