Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3784 |
Symbol | |
ID | 5317952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 230840 |
End bp | 231637 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640775597 |
Product | hypothetical protein |
Protein accession | YP_001312530 |
Protein GI | 150375934 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.575497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTCTG GTTTCATACG AACCTTGGCT TTGGCCGGAA CCTGCCTGCT TGCCGGCGGT GCCACGGCGG CAGACATCTA TTCTCCGGTG GCTCCGGAAA CCCAGCAGGT CACGACGGAG AGCGGCTGGA CGTTTTCCTT CTCTCCGTAC TTCTGGGCGG CAGGGCTGTC AGGGGATATC GAGCAGTTCG GTCTGCCCGC TGTCGATGTT GATGCGAGTT TCAGCGATGT CTTCGATCAT CTGGATTTTG CCTTGATGGC CACCGCAGAG GCACGCAACG GGCCATACAG CATTTTCGGC GACGCGATCT ATATCAAGCT TTCCGGCGAA GGCGGTACGC CCAGGGGAAT TATCGCAGAC GATGTCAAGC TCTCCACGGA GACATTCACC GGCACGCTCG GCGCCGGTTA TGCAATTTAT GAGGACAGTG CCGCGCGGCT CGATATCGTG GGAGGCCTGC GTGTCTGGTC CGTCGAAAGC GAATTGTCCT TCAGCGGCGG CATTCTCCCC CCCGGCGGTG TTTCGAGATC CGATGATGCG ACCTGGGTGG ATGGCATTGC AGGCTTTCGC GGGACATATT CGTTTACGCC CGAAGTCTAT CTGACGGGTT GGGGGCTGGT CGGTGCCGGC GGAGCCGATC TCGACTGGGA TGTCGCCGCA GCGATCGGCT ACCGCTTCAG CGATACGATT TCGGCGCTTG CCGGTTATCG TGCGCTCGGT GTCGACTACA GCAATGACGG ATTCGTCTTC GACGTCGTCG AGCAGGGGCC GATCCTCGGT CTGGTCGTGC GGTTCTAG
|
Protein sequence | MTSGFIRTLA LAGTCLLAGG ATAADIYSPV APETQQVTTE SGWTFSFSPY FWAAGLSGDI EQFGLPAVDV DASFSDVFDH LDFALMATAE ARNGPYSIFG DAIYIKLSGE GGTPRGIIAD DVKLSTETFT GTLGAGYAIY EDSAARLDIV GGLRVWSVES ELSFSGGILP PGGVSRSDDA TWVDGIAGFR GTYSFTPEVY LTGWGLVGAG GADLDWDVAA AIGYRFSDTI SALAGYRALG VDYSNDGFVF DVVEQGPILG LVVRF
|
| |