Gene Smed_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3784 
Symbol 
ID5317952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp230840 
End bp231637 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID640775597 
Producthypothetical protein 
Protein accessionYP_001312530 
Protein GI150375934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.575497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTG GTTTCATACG AACCTTGGCT TTGGCCGGAA CCTGCCTGCT TGCCGGCGGT 
GCCACGGCGG CAGACATCTA TTCTCCGGTG GCTCCGGAAA CCCAGCAGGT CACGACGGAG
AGCGGCTGGA CGTTTTCCTT CTCTCCGTAC TTCTGGGCGG CAGGGCTGTC AGGGGATATC
GAGCAGTTCG GTCTGCCCGC TGTCGATGTT GATGCGAGTT TCAGCGATGT CTTCGATCAT
CTGGATTTTG CCTTGATGGC CACCGCAGAG GCACGCAACG GGCCATACAG CATTTTCGGC
GACGCGATCT ATATCAAGCT TTCCGGCGAA GGCGGTACGC CCAGGGGAAT TATCGCAGAC
GATGTCAAGC TCTCCACGGA GACATTCACC GGCACGCTCG GCGCCGGTTA TGCAATTTAT
GAGGACAGTG CCGCGCGGCT CGATATCGTG GGAGGCCTGC GTGTCTGGTC CGTCGAAAGC
GAATTGTCCT TCAGCGGCGG CATTCTCCCC CCCGGCGGTG TTTCGAGATC CGATGATGCG
ACCTGGGTGG ATGGCATTGC AGGCTTTCGC GGGACATATT CGTTTACGCC CGAAGTCTAT
CTGACGGGTT GGGGGCTGGT CGGTGCCGGC GGAGCCGATC TCGACTGGGA TGTCGCCGCA
GCGATCGGCT ACCGCTTCAG CGATACGATT TCGGCGCTTG CCGGTTATCG TGCGCTCGGT
GTCGACTACA GCAATGACGG ATTCGTCTTC GACGTCGTCG AGCAGGGGCC GATCCTCGGT
CTGGTCGTGC GGTTCTAG
 
Protein sequence
MTSGFIRTLA LAGTCLLAGG ATAADIYSPV APETQQVTTE SGWTFSFSPY FWAAGLSGDI 
EQFGLPAVDV DASFSDVFDH LDFALMATAE ARNGPYSIFG DAIYIKLSGE GGTPRGIIAD
DVKLSTETFT GTLGAGYAIY EDSAARLDIV GGLRVWSVES ELSFSGGILP PGGVSRSDDA
TWVDGIAGFR GTYSFTPEVY LTGWGLVGAG GADLDWDVAA AIGYRFSDTI SALAGYRALG
VDYSNDGFVF DVVEQGPILG LVVRF