Gene Smed_3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3738 
Symbol 
ID5318666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp182084 
End bp183469 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content61% 
IMG OID640775551 
Productaminotransferase 
Protein accessionYP_001312484 
Protein GI150375888 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC GTCCAAACTC TCTCCATGCT CTCGACAAGC AGAGCCTCGT CCACCCCTAC 
ACGAACCTGG CCGTGCATCA GGAAACGGGA CCGCACGTGA TCACCGGCGG CGATGGGATC
TATGTCGTCG ACGACGAAGG CAAACGGTAT ATCGAGGGAC TGGCGGGCCT GTTCTGCGCC
GGTCTCGGCT TCAGCGAACA GCGCCTTGTC GAAGCTGCCA TGCGACAGCT CAAGACGATG
CCTTTCTATC ATTCCTTCGC ACACAAATCG ACAGAGCCCG GCATCAGGCT GGCGGAGAAA
CTGCTGTCGA TCGCGCCCGT CCCGATGTCG AAGGTGTTCT TTGCCGGCTC CGGTTCCGAG
GCGAACGACA CAGCGATCAA GCTCATTTGG TACTACAACA ACGCGCTCGG GCGACCCGAC
AAGAAGAAGA TTATTTCGCG CCGTAAGGCA TATCACGGCG TCACAGTCGC GACCGCGAGC
CTCACCGGCC TCCCGTTCAA TCACCGGGAT TTCGACCTGC CGATCGCTAA CATCCTCCAT
ACCGATTGCC CGCACTATTG GCGCTCCGCC GAGACCGGGG AGACGGAGGA AGACTTCGCC
ACGCGTATGG CCGACAATCT CGAAGCGACG ATCCTCGAAG AGGGTCCTGA AACGATCGCT
GCTTTCTTCG CCGAGCCCGT CATGGTCTCA GGCGGCGTCA TCACCCCGCC GAAAACCTAT
TTCGAAAAGG TCCAGGCGGT CCTCCGCAAA TACGATATCC TGCTTGTCGC CGACGAGGTG
ATCTGCGGTT TCGGTCGCAC GGGCAACATG TTCGGCTCAG AGACCTACGG ACTCAAGCCG
GACATGATCA GCTGCGCCAA GCAGCTGTCG GCCGCCTACA TGCCGATCTC CGCCCTGATG
ATCAACCAGA AGATCGCGGA CGCACTTGTG GACCAGAGCC GGAAGATAGG CACTTTCTCG
CACGGCTTCA CCTATGGCGG TCATCCGGTT GCAGCCGCCG TGGCGCTGCA AGCGCTGACG
ATCTACGAGG AGATCGATAT CGTCGGGCAT GTGCGTTCCG TCGCCCCCGT CTTTCAGGAT
CGCGCTCGGA AGCTCGGCGA GCATCCGCTG ATCGGCGAAG CCCGCGGCGT CGGTCTCGTT
GCTGGCTTCG AATTCGTCAA GGACAAGGCG ACCAGAGAGA ATTTCCCCCC CGCCTGGCAG
GTGGCAAACC AGGCCGGCAA GTTCGCGACC GCCCGCGGCG TCCTGACGCG CGGCCTCGGC
GATATGGTGA GCCTCTGCCC TGCAATGATC ATTGACGAGG GGCAGATCGA CGATCTCATG
ACGCGCATGG GCCTGGCGCT TGACGATACG CTGGCTTGGG CACGCACACA GGGCCATGTC
GCCTGA
 
Protein sequence
MNDRPNSLHA LDKQSLVHPY TNLAVHQETG PHVITGGDGI YVVDDEGKRY IEGLAGLFCA 
GLGFSEQRLV EAAMRQLKTM PFYHSFAHKS TEPGIRLAEK LLSIAPVPMS KVFFAGSGSE
ANDTAIKLIW YYNNALGRPD KKKIISRRKA YHGVTVATAS LTGLPFNHRD FDLPIANILH
TDCPHYWRSA ETGETEEDFA TRMADNLEAT ILEEGPETIA AFFAEPVMVS GGVITPPKTY
FEKVQAVLRK YDILLVADEV ICGFGRTGNM FGSETYGLKP DMISCAKQLS AAYMPISALM
INQKIADALV DQSRKIGTFS HGFTYGGHPV AAAVALQALT IYEEIDIVGH VRSVAPVFQD
RARKLGEHPL IGEARGVGLV AGFEFVKDKA TRENFPPAWQ VANQAGKFAT ARGVLTRGLG
DMVSLCPAMI IDEGQIDDLM TRMGLALDDT LAWARTQGHV A