| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3707 |
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| Symbol | ugpC |
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| ID | 5318427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 148673 |
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| End bp | 149722 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775520 |
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| Product | glycerol-3-phosphate transporter ATP-binding subunit |
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| Protein accession | YP_001312453 |
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| Protein GI | 150375857 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.151489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA TCAATCTTAC GGATGTCCAC AAGACCTATC AGGGCGACAT CGCCGCGATC
CGCGGCGTTT CGCTTGCGAT TGCCGATGGC GAGTTCATCG TGCTCGTCGG GCCTTCCGGC
TGCGGGAAGT CGACGCTGCT GAGGATGATC GCCGGGCTCG AAAGCATCAC CTCCGGCGAG
GTCTCCATCG GCGACCGCGT CGTCAACGGG CTCGAGCCTT CCGAGCGAGA CATTGCGATG
GTCTTTCAGA ACTACGCGCT CTATCCGCAC ATGACGGTCC GCCAGAACCT CAGCTATGGC
CTGAAGAACC GCAACACGCC GAAGGACGAG ATCGAGCGTC GGATAGCCAA GGCGGCGAAG
TCCCTGGAAA TAGAACCTTT CCTGGATCGA AAGCCGCGGC AGCTTTCAGG CGGTCAGCGC
CAGCGTGTGG CGATGGGGCG GGCGATTGTC CGGGAACCCG CCGCCTTTCT CTTCGATGAA
CCGCTTTCGA ACCTGGACGC AAAGCTCAGG GTCCAGATGC GCGTCGAGAT CAGGCGCCTT
CAGCGGGCTC TTGCCACGAC GAGCGTCTAT GTCACGCACG ACCAGCTCGA GGCGATGACG
CTCGCCGATC GCCTCGTCGT TCTGAACGGC GGCAGGATCG AGCAGGTGGG GACGCCCATC
GAGCTCTACG AGAAACCGGC GACGGCATTC GTCGCGACCT TCATCGGTTC ACCGTCGATG
AACCTGCTCG ATATCGGGAG CCACGATTCT GCGTGGACCG TTCCGGGGGG GCTGGTCGGG
AAACCGGGGC TTGCGACAAT CGGCATCCGG CCGGAGGACA TCACACTCGC GGATGGTTCG
GCCGGAGGCG ATCGTTTCAG AGCCCGGGTT CGCGTCGGTG CCGTGGAGCT GGTCGGCGCC
GAAAGTTACG TGCACGGTAC TTTGACCAAC GGCGAGCCGC TCGTCTTCAG AGTTGCCGGC
CGTTCCCGCA CGGCAATCGA CGAGGAGCTC GAGGTCGCAG CGGAACCGGA AAGCCTGCAT
TGGTTCGACG CCGCCGGCCG CCGCCTGTAG
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| Protein sequence | MATINLTDVH KTYQGDIAAI RGVSLAIADG EFIVLVGPSG CGKSTLLRMI AGLESITSGE
VSIGDRVVNG LEPSERDIAM VFQNYALYPH MTVRQNLSYG LKNRNTPKDE IERRIAKAAK
SLEIEPFLDR KPRQLSGGQR QRVAMGRAIV REPAAFLFDE PLSNLDAKLR VQMRVEIRRL
QRALATTSVY VTHDQLEAMT LADRLVVLNG GRIEQVGTPI ELYEKPATAF VATFIGSPSM
NLLDIGSHDS AWTVPGGLVG KPGLATIGIR PEDITLADGS AGGDRFRARV RVGAVELVGA
ESYVHGTLTN GEPLVFRVAG RSRTAIDEEL EVAAEPESLH WFDAAGRRL
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