Gene Smed_3661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3661 
Symbol 
ID5318675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp98966 
End bp99484 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID640775474 
ProductMarR family transcriptional regulator 
Protein accessionYP_001312407 
Protein GI150375811 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.185456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0917972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGC TGCACCACAT GAACAGAAAA AAGGAACAGG CAAGCCCCGG AGAAGAGCTT 
TCTCCCCGTC TCTCGCAAAC CGAGATCGAC AAGCGGCTGG TCGAGATCGG CTACAGGCTC
GAAGCTCACA ACGCCCATCT GATCCGGTTG GCGCACCAAA GGGCGACGTC GCTGTTCCAG
AAGGCCTTCG AGAACTACAC GATCACGCCG ACGCAGGTGG CGATCCTCGC GACGCTGCTT
CGGCACGGCG ACCTGTCGCA GATCAACCTC GGCCGGCTGA CCGCCATCGA CACGGCCACC
CTGAGCGCCA TGATGCGCCG CCTGCAGGAT AACGGCTTCA TCGAGCGAAT CCCATCAGAA
CAGGATCAGC GCGTCAATCT GGTGCGTCTG ACAGCGAGAG GCATAGAGTT CACATTGGAA
GTCCTGCCGA TCTCTCAGAA AGTCAGCGAC GAGGTCCTCG CTCCCCTCAA ACCGCGCGAC
CGCGAACGTT TCATCGAAAT GCTCAAGCTA CTGGGCTGA
 
Protein sequence
MRKLHHMNRK KEQASPGEEL SPRLSQTEID KRLVEIGYRL EAHNAHLIRL AHQRATSLFQ 
KAFENYTITP TQVAILATLL RHGDLSQINL GRLTAIDTAT LSAMMRRLQD NGFIERIPSE
QDQRVNLVRL TARGIEFTLE VLPISQKVSD EVLAPLKPRD RERFIEMLKL LG