Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3642 |
Symbol | |
ID | 5318184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 77941 |
End bp | 79716 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775455 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_001312388 |
Protein GI | 150375792 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) [TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGAA TTTGTGGAGA AATCAGGTTC GATGGCGGTT CGCCGTCGGT TAAGGCAGTA TCGATCATGT CGGACGTCCT GGCGCCGCGC GGACCGGACG GGTCGGGCGT CGTAGTGCGA GGAAATGTCG GGCTGGGACA TCGGCGTTTG CGCATCCTCG ACCTCTCCGA CAAGTCGCAG CAGCCGATGA TCGACCCCGA ACTCGGCCTA TCGCTCGTCT TCAACGGTTG CATCTACAAT TTCCGCGAGC TGAGGTCGGA GCTCGAGGAG AAAGGCTACA AGTTCTTTTC CTCCGGCGAT ACCGAGGTCA TCCTGAAGGC ATGGCATGCC TGGGGCGAGG AATGCGTCTC CCGGTTCCAC GGCATGTTTG CCTTCGTCAT TCACGAGCGT GACAGCGGCC GCGTTGTCAT GGCGCGCGAC CGTTTCGGCA TCAAGCCGCT CTATATCGCC GAAGTCGAGG GTGCGCTGCG CTTTGCTTCC TCCTTGCCTG CACTCGTCAA GGCGGGTGGT GTCGACACCT CGATCGATGT GGCGGCGCTC CACAACTACA TGACCTTTCA CGCGGTGGTG CCGCCCCCCC GTACGATCCT GAACGGCGTC CGCAAGCTTC CTCCGGCGAC CCTTCGCGTT TATGAACGCG GCGGCAGCTT CAAGGACCGG CGTTATTGGG ATCCGCCCTA TCGCCGGCAG GCGGGCGACG CAGCCATAAC CCGTGAGGAA TGGCAGGAGC GGCTTCTGGA TGCGCTGCGC ATTGCCGTGA AGCGGCGCAT GATCGCGGAC GTGCCGGTCG GGGTGCTGCT TTCCGGCGGG GTTGATTCCA GTCTGATTGT CGGACTTCTT GCTGAAGCGG GTCAGCGCGG CCTGATGAGC TTCTCCGTCG GCTTCGAAGA GGCTAACGGC GAAAAGGGCG ACGAGTTCGT CTATTCGGAC CTGATTGCCG AGCATTTCGG TACGGACCAC CGCAAGATCT TCGTTCCGTC CGCCGATTTG ATGGGCGCCT TGCCCGGCAC CATAACCGCT ATGTCTGAGC CTATGGTTTC CTACGACAAT GTCGGCTTCT ATCTGCTGTC GAAGGAGGTC TCCAAACACG TGAAGGTGGT GCAGTCCGGC CAGGGAGCGG ACGAGGTTTT CGGCGGCTAT CACTGGTATC CGCCACTGAT GAACTCGAAC GACGTCGTTG GAGATTACGG CAAGGCGTTT CGCGACCGTT CCCATGCGGT ATTGGCCACA CAGCTGTCGG ACCTGTGGCT TGCCGATCAC GATGTGAGCG GCGCGTTGCT CAACGAGCAT CTGCTGCGCG ACGGCGCCGA CACGCCGGTC GATCAGGCGC TCCGGCTCGA CAGCAATGTC ATGCTCGTCG ACGATCCCGT AAAGCGCGTC GACAACATGA CGATGGCCTG GGGCCTAGAA GCGCGGGTGC CTTTCCTCGA TCACGAGCTG GTCGAGCTCG CCGCGCGTAT TCCGCCGGAG GAGAAGCTGC GCGACGGTGG CAAGGGCATC CTGAAGGACG TGGCCCGCAA GATCGTTCCG AGCGAGGTGA TCGACCGCAA GAAGGGCTAT TTTCCGGTGC CGCAGCTCAA ATACATTGCG GGTCCATATC TCGACCTGAT CCGCGATACG CTGAACTCGC AGAGGGCGCG TGAGCGGGGC CTCTTCCGCG ACACCTATCT CGACCGCCTG TTCGAGCAGC CGTCTGATCA CATCACACCG CTGCGCGGCT CCGAGCTGTG GCAGGTGGGA CTGCTCGAAA TGTGGCTCGA AGCGCAGGGG GTGTAG
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Protein sequence | MCGICGEIRF DGGSPSVKAV SIMSDVLAPR GPDGSGVVVR GNVGLGHRRL RILDLSDKSQ QPMIDPELGL SLVFNGCIYN FRELRSELEE KGYKFFSSGD TEVILKAWHA WGEECVSRFH GMFAFVIHER DSGRVVMARD RFGIKPLYIA EVEGALRFAS SLPALVKAGG VDTSIDVAAL HNYMTFHAVV PPPRTILNGV RKLPPATLRV YERGGSFKDR RYWDPPYRRQ AGDAAITREE WQERLLDALR IAVKRRMIAD VPVGVLLSGG VDSSLIVGLL AEAGQRGLMS FSVGFEEANG EKGDEFVYSD LIAEHFGTDH RKIFVPSADL MGALPGTITA MSEPMVSYDN VGFYLLSKEV SKHVKVVQSG QGADEVFGGY HWYPPLMNSN DVVGDYGKAF RDRSHAVLAT QLSDLWLADH DVSGALLNEH LLRDGADTPV DQALRLDSNV MLVDDPVKRV DNMTMAWGLE ARVPFLDHEL VELAARIPPE EKLRDGGKGI LKDVARKIVP SEVIDRKKGY FPVPQLKYIA GPYLDLIRDT LNSQRARERG LFRDTYLDRL FEQPSDHITP LRGSELWQVG LLEMWLEAQG V
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