Gene Smed_3630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3630 
Symbol 
ID5318316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp64756 
End bp65256 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content61% 
IMG OID640775444 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_001312377 
Protein GI150375781 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAGG GGTTCTTTCT TCTGTTCGCT ACGGTGTCCG TGGTCACGGC CCTGACGCTG 
GTCCTGGCGC GCAATCCGGT TCACAGCGCA TTGGCGTTGA TGGCGTGCTT CCTGCAGATT
TCCGCAATTT TCGTTATGCT CGGTGCACCG CTGCTCGCTG TCATCCAGAT TTTCGTCTAT
GTCGGCGCGA TCATGGTCCT TTTCCTATTC GTGATTATGA TGGTCGACGT GCGCGAAGCG
GTGCTGCAGC GCTTCATGCC CGGCGGCAAC CTGCCGGCGC TCGCGCTGCT CCTGCTGCTC
GGTACCGAGA TGGTCGTGCT GGTGCTCTGG AGCGATCGCT TCATCGAATC GCCCCCCGTA
GCCGAGCGCG GTGGTGATGC GATCAGAGAT CTCAGCAAGA CGCTCTTCTC GGACTATCTC
CTGCCGTTTG AAATCGCCTC CGTCATCCTG CTGGCGGCTC TCGTCGGCGC CATCGTGCTG
GCGCGGAAGG AGCCTGGCTG A
 
Protein sequence
MHQGFFLLFA TVSVVTALTL VLARNPVHSA LALMACFLQI SAIFVMLGAP LLAVIQIFVY 
VGAIMVLFLF VIMMVDVREA VLQRFMPGGN LPALALLLLL GTEMVVLVLW SDRFIESPPV
AERGGDAIRD LSKTLFSDYL LPFEIASVIL LAALVGAIVL ARKEPG