| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3621 |
|---|
| Symbol | |
|---|
| ID | 5318152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 56449 |
|---|
| End bp | 56997 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640775435 |
|---|
| Product | NADH (or F420H2) dehydrogenase, subunit C |
|---|
| Protein accession | YP_001312368 |
|---|
| Protein GI | 150375772 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGG AGCGGCCTGT CGATCTTCTA TCGATCATCG GGAGCTTCGT AGGAGCAGTC
GAGGGTCTCG GCGCTGCGCA CGGCATTCAT GCCTTTGCCG TCCCACCGGA GCAGATCGTC
GAGTTCTGTC GGTTCCTGAA AGAACATCCG GCGCTTCAGT TCAGTTTTCT CTCTGACATC
TGCGGCGTCG ATCATTATCC CGACTTGCCG CGCTTCGAGA CGGTTTACCA CCTCTATTCG
CTGAATAACA AATGGCGCGT TCGCATCAAG TGCCGGCTCG GCGACCCACC GCATGTTCCC
TCTGTCACGG GAGTCTGGCG AACCGCCAAT TGGCATGAGC GCGAGGCCTG GGACATGTAC
GGCATCCGCT TCGAAGGGCA TCCGGATCTG CGCCGGATCT ACATGTGGGA AGGTTTTGAG
GGCTTTCCGC AGCGGAAGGA TTTCCCCTTG AGGGGCTACA AGGACAAGCT GAACCCCTTT
GGAGCCGAGG GTCCGCCGCC AACGCAGCCG GACCTCGCCA CTAGAGATAT ACCCCAAGGA
GGCCATTAG
|
|---|
| Protein sequence | MTGERPVDLL SIIGSFVGAV EGLGAAHGIH AFAVPPEQIV EFCRFLKEHP ALQFSFLSDI
CGVDHYPDLP RFETVYHLYS LNNKWRVRIK CRLGDPPHVP SVTGVWRTAN WHEREAWDMY
GIRFEGHPDL RRIYMWEGFE GFPQRKDFPL RGYKDKLNPF GAEGPPPTQP DLATRDIPQG
GH
|
|---|
| |