| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3618 |
|---|
| Symbol | |
|---|
| ID | 5318149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 53420 |
|---|
| End bp | 54685 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640775432 |
|---|
| Product | NADH-quinone oxidoreductase, F subunit |
|---|
| Protein accession | YP_001312365 |
|---|
| Protein GI | 150375769 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.997911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGC CGGTCCTGCT CAGAAATGTC GATGTGCCGG ACGGTCATCT GCTGTCGACC
TACCAGGTCG GCGGCGGCTA CCAAGCGCTC ACGAAGGCAC TCGGCGAATA TACACCCGAC
GAGATCGTCG AGCTCGTCAA GGAGTCCAAC CTGCGCGGCC GCGGGGGTGC CGGGTTCCCG
ACGGGCATGA AGTGGAGCTT CGTGCCGAAA GCGGCCGGCA AGCCGAAATA TCTCTGCTGC
AATGCCGATG AAGGGGAACC CGGCACCTTC AAGGACCGCA TCATCATGGA GCGCGACCCG
CATCAGCTCA TCGAGGGGCT GGCGGTCAGC GCCTATGCAA TCGGGGCCGA AACCGCTTAC
GTCTACATTC GCGGAGAATA TGTGACGGCT ATTCGCCGCA TGGAACAGGC GATCGCCCAG
GCGCATGAAA ACGGCTATCT GGGCACCGGC ATTCTTGGCT CCAACTTCAA ATTCATGGTC
CACATCCATC GCGGTGCCGG CGCCTATATC TGCGGAGAGG AGACCGCAAT GCTCGAGTCT
CTCGAGGGCA AGCGGGCGCA GCCGCGACTG AAGCCGCCGT TTCCTGCTGT AGCCGGCCTC
TATGCCAGCC CAACGGTCAT CAACAATGTC GAGACGCTTG CCTGCGTGCC GCATATCGTG
ATGCGCGGAT CGGCATGGTT CCGCGGCATA GGGCCGGACA GGAGTCCCGG CCCGAAGCTC
TACTGTGTGA GCGGTCAGGT GCGCAAACCC GGCCTCTATG AGCTGCCGAT GGGCATATCG
CTGCGGGAAC TCGTAGAGGA ATACGCCGGC GGACCCCTGC CGGGGCGAAA GGTCAAGGCG
GTGATTCCCG GCGGAGTCTC GGCGCCGGTG ATCCCGGAGA GCGACCTCGA GGTGGGCATG
GATTTCGACT CGCTTGCCGC CGCCGGTTCG ATGCTCGGTT CGGCGGGCGT GGTCGTGATC
GACGACTCGA CCTGCATGGT CAAGATCGCA ACGCGGATCA TCGAGTTCTT CCACCATGAG
TCCTGCGGCA AGTGCACGCC ATGCCGGGAA GGTTTGAACT GGACCGTGAA AGTCCTGCGG
CGCATCGAGG CAGGCGAGGG CGAAACCGGC GACCTGGAGC AGTTGGAGAT GCTCTGCAAG
GGCATTTTCG GTAACACGTT TTGTGCACTG GGCGACGGCG CGGCCATGGG GCTGCGCGCC
GCGCTCAAGC ATTTCCGCGA GGAGTTCGTC GCCCATATCG AAGAGCGGAG GTGCCCTTTC
CACTGA
|
|---|
| Protein sequence | MFEPVLLRNV DVPDGHLLST YQVGGGYQAL TKALGEYTPD EIVELVKESN LRGRGGAGFP
TGMKWSFVPK AAGKPKYLCC NADEGEPGTF KDRIIMERDP HQLIEGLAVS AYAIGAETAY
VYIRGEYVTA IRRMEQAIAQ AHENGYLGTG ILGSNFKFMV HIHRGAGAYI CGEETAMLES
LEGKRAQPRL KPPFPAVAGL YASPTVINNV ETLACVPHIV MRGSAWFRGI GPDRSPGPKL
YCVSGQVRKP GLYELPMGIS LRELVEEYAG GPLPGRKVKA VIPGGVSAPV IPESDLEVGM
DFDSLAAAGS MLGSAGVVVI DDSTCMVKIA TRIIEFFHHE SCGKCTPCRE GLNWTVKVLR
RIEAGEGETG DLEQLEMLCK GIFGNTFCAL GDGAAMGLRA ALKHFREEFV AHIEERRCPF
H
|
|---|
| |