Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3599 |
Symbol | |
ID | 5318433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 26228 |
End bp | 26983 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775413 |
Product | GntR domain-containing protein |
Protein accession | YP_001312346 |
Protein GI | 150375750 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.83049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGGAC GACATGATCA GCCGACGGAT TCGGGCAGCA CGCCTTCTCG TCGTCCCCGT GTGCAGAAGG ATGTCACCCG GGCTCTTGCC GCCGACATCT GCGGCGAGAA TTATCCGGCA GGCAGCTATC TACCGCGGGA GAACGACCTG TGCGAACGCT ACGGCGTCAG CCGAACGGTC ATACGCGAAT CACTGAAGAT TCTGGAATCG AAGGGGCTGG TGCGCGGTCG TTCACGCGTC GGCACCGTCG TCTGCAGCAA GGACGAATGG AACATTCTCG ATCAGCAGGT GCTCGAGTGG ATCGGTGATC GGATTTTCCA GTTCGATCTT CTGAACTGTA TTCTCGAAGC GCGCCGTGCG ATCGAGCCTG TTGCTGCAGA GTTGGCGGCG AGGCGCGCAA CGGTGCAGGA AATCGCCGAG ATCGAGCGCG CCTGGCAGCA GATGAGGGAT GCCGAGGGCG ACCTCGCGAA GTTCACGGCA GCAGACGTCG CTTTTCACGA ATCGCTCCTC AAGGCCAGCC ATAATCAGGT GTTCCAGCAA CTGGCGAGCA TTATACAGGC CGGCCTCAAA TTCTCGCTGC AGGCCTCCAA CGAGGCGGCG GACACGCGGG CCGGTGCCGT GGAGATACAC AGGCAACTGG TCGAAGCATT GCGGATGCGG GACGCGACTG CAGCGCGTGA CTGTTCCTGG CAGCTGCTGG ACCTTGCCGC ACGTGATCTC GCTCTCGCCG TCGAGCGACA CTCACCTCCG GCGTGA
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Protein sequence | MQGRHDQPTD SGSTPSRRPR VQKDVTRALA ADICGENYPA GSYLPRENDL CERYGVSRTV IRESLKILES KGLVRGRSRV GTVVCSKDEW NILDQQVLEW IGDRIFQFDL LNCILEARRA IEPVAAELAA RRATVQEIAE IERAWQQMRD AEGDLAKFTA ADVAFHESLL KASHNQVFQQ LASIIQAGLK FSLQASNEAA DTRAGAVEIH RQLVEALRMR DATAARDCSW QLLDLAARDL ALAVERHSPP A
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