Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3487 |
Symbol | pheT |
ID | 5324375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3693533 |
End bp | 3695959 |
Gene Length | 2427 bp |
Protein Length | 808 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640792439 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001329140 |
Protein GI | 150398673 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTCA CGCTCTCCTG GTTGAAGGAC CATCTGGAAA CCGAAGCCTC GCTCGAGGAA ATCTGCGCCC GCCTGACGAT GATCGGGCTG GAAGTCGAAG ATGTCGACGA CAAGGCGGCC TTCAAGCCGT TCGTCATTGC AAAAGTGATC TCCGCCGAGC AGCACCCGAA TGCCGACAAG CTCAGAGTGC TGATGGTCGA TACCGGTTCC GGCGAGCCGG TGCAGGTGGT CTGCGGCGCA CCGAACGCGC GCAAAGGCCT CGTCGGCGCC TTTGCCGCGC CCGGTACCTA TGTGCCCGGC ATCGGTGTGA CACTCTCCGT CGGCAACATT CGCGGCGTCG AAAGCCGCGG CATGATGTGC TCGGAAAAGG AGCTGGAGAT CTCCGACGAC CATAACGGCA TCATCGATCT GCCCGAGGAT GCGCCTGTAG GCGCCAGCTA TGCGGATTTT GCCGGCCTCG ACGATCCCGT CATCGCGATC AACCTGACAC CGAACCGGCC GGATTGCACC AGCGTCCACG GCATCGCCCG CGATCTCGCG GCATCCGGTC TCGGCACCTT GAAGACGCGG CCGATGCCGT CCTTCGCCGT GGAAGGCGAG ACGCCGGTCA AGGTCCGCCT CGATCTCGGC GAAGACGGGC ATCTGTGCCC CGGCTTCGCG CTCCGCCTTG TGCGCGGCGT CAAGAACGGT CCGAGTCCCG CATGGATGCG CCGGCGGCTG ATGGCCATCG GCTTGAGGCC GATCAATGCG CTGGTCGACA TCACCAATTA CCTGACCTTC GATCAGGGCC GGCCGCTTCA CGTCTTCGAC GCGGCAAAGG TTGCCGGCAA CCTGACGGTT CGCCGTGCCA GGGAAGGTGA AAAGGTGTTG GCGCTCGATA CGCGCGAATA CATGCTGTCG CCCGCCAATG TGGTGATTGC CGATGAGGAA GGCGTTGAAT CGATCGGCGG CATCATGGGC GGTGAGCATT CCGGCTGCGA CGAGACGACG ACTGACGTGC TGATCGAATC GGCGCTTTGG GATCCGATGA ACATCGCCAG GACCGGCCGC ACGCTCAGCA TTATCACCGA TGCGCGCTAC CGCTTCGAAC GCGGGGTCGA TCCGGAATAC ATGGTGCCGG GCCTCGAACG CGCCACCGAA CTGGTACTGG AACTCTGCGG CGGGACCGCG GCGAGGATGG ACGTCGTCGG TTATGACGGC CACACGCCCA AGCGTGCAGA TTTCCCCGTC AGCGAGGTGA AGCGCCTCAC CGGCCTTGAG GTTTCCTCCG AGGAGAGCGT CTCCATTCTC CGGAAGCTCG GCTTCGGCGT CGAGGGCTCC GGCGAACGCC TGACGGTGAA GGTGCCTTCC TGGCGGCCGG ACATCGATGG CAAGGCGGAC CTCGTCGAGG AAGTGATGCG CATCCATGGA GTCGACAATA TCGTTGCCGC CCCGCTTGCG AGCCATAATG CGGTCAACGG CAGGATCCTG ACGGTGCTGC AGATCCGCAC ACGCCAGGCG AGGCGTGCTC TCGCGAGCCG CGGCATGCTC GAGGCGGTTA CATGGTCCTT CATCCCCCAA GAGCATGCGA AGCTCTTCGG GGGCGGCCAG CCGGAACTCA AGCTTGCCAA TCCGATCGCC GCCGACATGT CGGACATGCG GCCGTCGTTG CTGCCGGGTC TTCTGGCCGC GGCGCAGCGC AACGCCGACA AAGGCCATGG GGATGTTGCG ATCTTCGAGG TATCCGGTAC CTATGAGGGC GACACGCCCG GGGCGCAGCG CCGCGTCGCC GGCGGCGTGC GTCGCGGCAC AGCCTCGCTC AACGGCGCCG GCCGGCTCTG GTCCAATTCG ATGAAGGGCG GCGGCAAGCC GGTCGATGTC TTCGATGCGA AGGCCGATGC GATCGCCGTG CTCGAAGCCT GCGGCGTGCC GATGGCTAAT GTCCAGTTCG AAGCCGGTGG CCCGGCCTGG TACCATCCCG GCCGCTCGGC GACGATCAAG CTCGGACCGA AAATCGTCCT CGGCGCTTTC GGAGAATTCC ATCCGAAGAC CCTCGACGTC CTTGATGTCT CCGGCCCGCT TTCAGGCTTC GAAGTCTATA TCGATGCCAT GCCCGAGCCG AAAAGGAAGG CGACCCGCAC CAAGCAAGCG CTGGAGCTCT CAGCCTTCCA GGCAGTCAAG CGCGACTTCG CTTTCGTGGT TGACCGGGAC GTCGAAGCCG CCGCGATCGT CCGCGCCGCC ACCGGCGCCG ACCGGAAGCT GGTGACCTCC GTCAACGTCT TCGACGTCTT CGAAGGCGCA TCCCTCGGCG AGGGCAAGAA ATCGGTGGCG ATCGAGGTGA CGATTCAGCC GGTCGAGCGC ACGCTGACGG ATGAGGACTT CGAGGCGTTG ACCGCGCGCA TCGTGGCCAA TGTCGCGAAG AGCACCGGCG GCGTACTGCG CGCTTGA
|
Protein sequence | MKFTLSWLKD HLETEASLEE ICARLTMIGL EVEDVDDKAA FKPFVIAKVI SAEQHPNADK LRVLMVDTGS GEPVQVVCGA PNARKGLVGA FAAPGTYVPG IGVTLSVGNI RGVESRGMMC SEKELEISDD HNGIIDLPED APVGASYADF AGLDDPVIAI NLTPNRPDCT SVHGIARDLA ASGLGTLKTR PMPSFAVEGE TPVKVRLDLG EDGHLCPGFA LRLVRGVKNG PSPAWMRRRL MAIGLRPINA LVDITNYLTF DQGRPLHVFD AAKVAGNLTV RRAREGEKVL ALDTREYMLS PANVVIADEE GVESIGGIMG GEHSGCDETT TDVLIESALW DPMNIARTGR TLSIITDARY RFERGVDPEY MVPGLERATE LVLELCGGTA ARMDVVGYDG HTPKRADFPV SEVKRLTGLE VSSEESVSIL RKLGFGVEGS GERLTVKVPS WRPDIDGKAD LVEEVMRIHG VDNIVAAPLA SHNAVNGRIL TVLQIRTRQA RRALASRGML EAVTWSFIPQ EHAKLFGGGQ PELKLANPIA ADMSDMRPSL LPGLLAAAQR NADKGHGDVA IFEVSGTYEG DTPGAQRRVA GGVRRGTASL NGAGRLWSNS MKGGGKPVDV FDAKADAIAV LEACGVPMAN VQFEAGGPAW YHPGRSATIK LGPKIVLGAF GEFHPKTLDV LDVSGPLSGF EVYIDAMPEP KRKATRTKQA LELSAFQAVK RDFAFVVDRD VEAAAIVRAA TGADRKLVTS VNVFDVFEGA SLGEGKKSVA IEVTIQPVER TLTDEDFEAL TARIVANVAK STGGVLRA
|
| |