Gene Smed_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3486 
SymbolpheS 
ID5324374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3692417 
End bp3693499 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content62% 
IMG OID640792438 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_001329139 
Protein GI150398672 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.182807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TGGAAACATT GGAACGTACC TTGCTGGCGG AGATCGAAGC CGCCGCCGAC 
GAGGGAGCGA TCGAGGCGGT ACGCGTTGGC GCACTCGGCA AAAAGGGATC AATCTCGGAA
CTCCTGAAGA CGCTCGGTTC GATGAGTGCG GAGGAGCGCC AGACCCGCGG CGCCCGCATC
AACGCGCTGA AGAACACGGT GAGCGAGGCG ATCTCCGCCC GGAAGGCGGA GCTCAAGGAC
GCGGCGATCG CTGAGCGCCT GGCGCGCGAG ACGGTGGACA TCAGTCTTCC CGTCCGGTCC
TCGCCGGCGG AGCGCGGCCG CATCCATCCG ATCAGCCAGA TCGTCGATGA AATCACCGCG
ATTTTTGGCG ATATGGGTTT CTCGCTCGCC GAGGGGCCGG ATATCGAGAC GGACTACTAC
AATTTCACGG CGCTGAATTT CCCGGAAGGC CACCCGGCCC GCGAGATGCA CGACACCTTC
TTCTTCGCGC CGGACGAGAA GGGTGAGCGG AAGGTGCTGC GCACGCACAC CTCTCCGGTG
CAGATACGCA CGATGGAAGC CGAGCAGCCG CCGATCCGCA TCATCATTCC CGGCAAGACC
TATCGTCAGG ATTCGGACGC GACCCACTCG CCGATGTTCC ATCAGGTGGA AGGCCTCGTC
ATCGACAGGA CGGCGAATGT CGCCAACATG CGGTGGGTAC TCGAGGAATT CTGCAAGGCC
TTCTTCGAAG TGGATCAGGT GACGATGCGC TTCCGTCCGT CCTTCTTCCC CTTCACGGAA
CCCTCCTTCG AGGTGGATAT CCAGTGCGAC CGTTCCGGCC CGATCGTAAA GTTCGGCGAA
GGCAAGGACT GGATGGAGAT TCTCGGTTGC GGCATGGTGC ATCCGAACGT GCTTCGGGCT
GGCGGCCTCG ACCCGGACGA ATTTCAAGGC TTCGCCTGGG GCATGGGCCT CGATCGTATC
GCCATGCTGA AATACGGCAT GCCGGACCTG CGCGACTTCT TCAATGCCGA TGTCCGCTGG
ATGACCCATT ACGGCTTCCG CCCGCTCGAC ATGCCGACGC TCTTCGGCGG CCTCTCGGCG
TAA
 
Protein sequence
MSELETLERT LLAEIEAAAD EGAIEAVRVG ALGKKGSISE LLKTLGSMSA EERQTRGARI 
NALKNTVSEA ISARKAELKD AAIAERLARE TVDISLPVRS SPAERGRIHP ISQIVDEITA
IFGDMGFSLA EGPDIETDYY NFTALNFPEG HPAREMHDTF FFAPDEKGER KVLRTHTSPV
QIRTMEAEQP PIRIIIPGKT YRQDSDATHS PMFHQVEGLV IDRTANVANM RWVLEEFCKA
FFEVDQVTMR FRPSFFPFTE PSFEVDIQCD RSGPIVKFGE GKDWMEILGC GMVHPNVLRA
GGLDPDEFQG FAWGMGLDRI AMLKYGMPDL RDFFNADVRW MTHYGFRPLD MPTLFGGLSA