| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3477 |
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| Symbol | |
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| ID | 5324365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3684236 |
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| End bp | 3685288 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640792429 |
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| Product | lysine--tRNA ligase |
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| Protein accession | YP_001329130 |
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| Protein GI | 150398663 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCATG CTTCTCCCTG GTGGACCCGC GATGTCCATG CCGACCGGCG CCCTTTCCTG
ATCGGGCGCA ATCGCATCCA GTCGGCGCTC CGCCGGTTCT TCGACGAACG GGATTTCATC
GAGGTCGACA CGGCAGCACT GCAGGTGTCC CCGGGTAACG AGGCCCATCT GCATGCCTTC
GCGACGCAGG CGCTTGGACT CGACGGCTCT GTGCAGCCGC TCTACCTCCA CACTTCGCCC
GAATTCGCCT GCAAGAAGCT CATTGCAGCC GGCGAACGGC GCATCGCCTG CTTCGCCCAT
GTCTACCGCA ATCGCGAGCG TGGGGCCCTG CATCATCCGG AGTTCACCAT GCTCGAATGG
TATCGGGCAG AAGAAAGCTA CGAAACGCTG ATGCGCGACT GCGCCGAAAT CCTGGCGCTT
GCCGCCGAAA CCGTTGCGGC GCGGTCTCTC GTTTACGGGG GACGAGAGTG CGATCCCTTC
GCAGAGCCGG AACGGCTCTC GGTCGCCGAA GCATTCTCGC GCTTCGCCGG GATCGACCTC
CTCGGCTCCA TCGCAAAGGA CGGTTCCACG GACCGCGAAA ACCTCGCGGC GGCCATGCGG
AAGGCAGGCT TGCGTGTCGC GCGCGACGAT GGCTGGGCCG ACCTCTTCAG CCGCGTGCTC
GTCGAAAAGA TCGAGCCGAA TCTCGGCTTC GGGCGCGCCA CGATCCTCGA CGAATATCCG
GTTTCCGAAG CAGCGCTTGC GCGGCGCGCA GCGCGCGACC CGCGGGTCGC GGAGCGTTTC
GAGCTCTATG CCTGTGGCGT CGAGCTCGCA AACGCCTTCG GCGAACTGAC CGACGCTGCC
GAGCAACGTC GCCGCTTCGC GCTCGAGATG GAGGAAAAGG CGCGGGTCTA TGGCGAGACC
TACCCGATCG ACGACGACTT CCTTGCGGCG CTCTCCAGCA TGCCCGAGGC GAGCGGCATT
GCGCTTGGTT TCGATCGCCT GGTCATGCTC GCGACGGGGG CTTCCCGCAT CGACCAGGTC
CTCTGGGCTC CGGTCGCGGA GGTCACGCCA TGA
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| Protein sequence | MPHASPWWTR DVHADRRPFL IGRNRIQSAL RRFFDERDFI EVDTAALQVS PGNEAHLHAF
ATQALGLDGS VQPLYLHTSP EFACKKLIAA GERRIACFAH VYRNRERGAL HHPEFTMLEW
YRAEESYETL MRDCAEILAL AAETVAARSL VYGGRECDPF AEPERLSVAE AFSRFAGIDL
LGSIAKDGST DRENLAAAMR KAGLRVARDD GWADLFSRVL VEKIEPNLGF GRATILDEYP
VSEAALARRA ARDPRVAERF ELYACGVELA NAFGELTDAA EQRRRFALEM EEKARVYGET
YPIDDDFLAA LSSMPEASGI ALGFDRLVML ATGASRIDQV LWAPVAEVTP
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