| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3405 |
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| Symbol | |
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| ID | 5324289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3612265 |
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| End bp | 3613524 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640792356 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001329061 |
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| Protein GI | 150398594 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CGACAATGAA AGGCCTACTG CTTGCATCGA GCATTCTCGG ATCGGCCGGG
CTAGTACAAG CCCAGGACGC AACGCTGACG ATCGAAAGCT GGCGCAATGA CGACCTGGCG
ATCTGGCAGG AAAAGCTGAT CCCGGCCTTC GAGGCGAAGA ACCCCGGCAT CAAGGTGGTG
TTCGCTCCCT CGGCCCCGAC TGAATACAAT GCCGCGCTCA ACGCCAAGCT CGACGCCGGT
TCCGCGGGCG ACCTCATCAC ATGTCGGCCC TTCGATGCCT CACTCGAACT CTACAATAAG
AAACATCTCG CCGACCTGAC CGGTCTTTCC GGCATGGAGA ACTTCTCGGA CGTCGCCAAG
TCCGCCTGGA CGACAGACGA CGGCAAGGCG ACTTTCTGCG TACCGATGGC CTCCGTCATC
CACGGCTTCA TCTACAACAA GGATGCCTTC GACCAGCTCG GGCTCGCCAT TCCGGCGACG
GAAGAGGAAT TCTTCGCGGT TCTCGAAAAG ATCAAGGCGG ACGGCAACTA CATTCCAATG
GCGATGGGCA CCAAGGATCT CTGGGAAGCC GCGACGATGG GCTACCAGAA CATCGGCCCG
ACCTACTGGA AGGGCGAGGA AGGCCGTCTG GCTCTTCTGA AAGGCCAGCA GAAGCTCACC
GACGAACCAT GGGTGGAACC TTTCCGCGTA CTGGCAAAGT GGAAGGATTA TCTCGGCGAC
GGTTTCGAGG CACAGACCTA TCCGGACAGC CAGAACCTCT TCACGCTCGG CCGTGCGGCC
ATCTATCCGG CCGGCTCCTG GGAAATCTCG GGCTTCAACA CGCAGGCCGA ATTCAAGATG
GGGGCCTTTC CGCCGCCGGT GAAGAAGGCC GGCGACACCT GCTACATTTC CGACCATAAC
GACATCGGCA TCGGGCTCAA TGCCAAGAGC AAGAATGCCG ATGCCGCCAA AACCTTCCTC
ACCTGGGTCG CCTCGCCGGA ATTCGCGGAA ATCTATGCGA ACGCCCTGCC CGGCTTCTTC
AGCCTGAATT CGACGGCGGT AAAGATGTCC GATCCGCTCG CCCAGGAATT CGTCTCCTGG
CGGGAGAAAT GCAAGCCGAC CATCCGCTCG ACCTATCAGA TCCTGTCGCG CGGAACCCCG
AACCTCGAGA ATGAGACCTG GGTCATGTCG GCCAACGTCA TCAACGGCAC AGACACGCCG
GAGGCGGCCG CCAAGAAGCT CCAGGACGGG CTCGACAGCT GGTTCAAGCC GGTAAAATAA
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| Protein sequence | MTRTTMKGLL LASSILGSAG LVQAQDATLT IESWRNDDLA IWQEKLIPAF EAKNPGIKVV
FAPSAPTEYN AALNAKLDAG SAGDLITCRP FDASLELYNK KHLADLTGLS GMENFSDVAK
SAWTTDDGKA TFCVPMASVI HGFIYNKDAF DQLGLAIPAT EEEFFAVLEK IKADGNYIPM
AMGTKDLWEA ATMGYQNIGP TYWKGEEGRL ALLKGQQKLT DEPWVEPFRV LAKWKDYLGD
GFEAQTYPDS QNLFTLGRAA IYPAGSWEIS GFNTQAEFKM GAFPPPVKKA GDTCYISDHN
DIGIGLNAKS KNADAAKTFL TWVASPEFAE IYANALPGFF SLNSTAVKMS DPLAQEFVSW
REKCKPTIRS TYQILSRGTP NLENETWVMS ANVINGTDTP EAAAKKLQDG LDSWFKPVK
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