| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3390 |
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| Symbol | |
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| ID | 5324274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3595879 |
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| End bp | 3597006 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792341 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001329046 |
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| Protein GI | 150398579 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.44272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG ATCTTTACGA AACGCTTGGC GTTCAGAAAA GCGCGGACGA AAAGGAGCTG
AAGAGCGCCT TTCGCAAGCT CGCGATGAAA TATCATCCGG ACAGGAATCC CGGAGACAAT
GAAGCGGAAA AGTCATTCAA GGAAATCAAC GAAGCCTACG AGACGCTGAA GGATCCGCAG
AAACGCGCGG CCTATGACCG CTATGGCCAT GCGGCCTTCG AGCAGGGCGG CATGGGCAAC
GGCTTCGCCG GTGGTGGCGC GCACGGCTTC TCCGATATTT TCGAGGACAT CTTCGGCGAG
ATGATGGGTG GCCGGCAGCG CCGCTCGTCC GGTGGACGCG AGCGCGGCGC GGACCTGCGT
TACAACATGG AAATCTCGCT CGAGGAGGCC TATTCCGGCA AGACGGCGCA GATCCGCGTG
CCTACGTCGA TCACCTGCGA CGTCTGCACC GGTACGGGCG CCAAGCCGGG GACCAGCCCG
AAGACCTGCG GCACCTGCCA AGGCACCGGC CGCGTCCGCG CCGCCCAAGG CTTCTTCTCG
ATCGAGCGAA CCTGCCCGAC CTGCGGCGGC CGCGGACAGA CGATCACCGA CCCGTGCACC
AAGTGCCATG GTCAGGGCCG CGTCGTGGAG GAGCGGACGC TCTCGGTCAA CATTCCGGCC
GGTATCGAGG ACGGCACGCG CATCCGGCTT TCCGGCGAGG GCGAGGCTGG CCTTCGCGGC
GGCCCGGCTG GCGACCTCTA CATCTTTCTC TCGGTCAAGC CGCACGAATT CTACCAGCGT
GACGGCGCGG ATCTCTACTG CGCCGTGCCG ATCTCGATGA CGACGGCAAC GCTCGGCGGC
AAGTTCGACG TCACGACGCT CGACGGAACC AAATCTCGCG TCACGGTGCC TGAAGGCACA
CAGGCCGGCA AGCAGTTCCG CCTCAAGGGC AAGGGCATGC CGGTGCTGCG TTCCAGCCAG
ATGGGCGATC TCTATATTCA GATCCAGATC GAGACACCGC AGAAGCTCAC GAAGCGGCAA
CGTGAGTTGC TGCAGGAGTT CGAGCAGATC TCCTCCAAGG AGAACAATCC CGAATCGGCA
GGCTTCTTCT CCCGCATGAA GGGTTTCTTC GACACGTTGA GCGAGTAG
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| Protein sequence | MKRDLYETLG VQKSADEKEL KSAFRKLAMK YHPDRNPGDN EAEKSFKEIN EAYETLKDPQ
KRAAYDRYGH AAFEQGGMGN GFAGGGAHGF SDIFEDIFGE MMGGRQRRSS GGRERGADLR
YNMEISLEEA YSGKTAQIRV PTSITCDVCT GTGAKPGTSP KTCGTCQGTG RVRAAQGFFS
IERTCPTCGG RGQTITDPCT KCHGQGRVVE ERTLSVNIPA GIEDGTRIRL SGEGEAGLRG
GPAGDLYIFL SVKPHEFYQR DGADLYCAVP ISMTTATLGG KFDVTTLDGT KSRVTVPEGT
QAGKQFRLKG KGMPVLRSSQ MGDLYIQIQI ETPQKLTKRQ RELLQEFEQI SSKENNPESA
GFFSRMKGFF DTLSE
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