Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3384 |
Symbol | |
ID | 5324268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3587713 |
End bp | 3588660 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640792335 |
Product | hypothetical protein |
Protein accession | YP_001329040 |
Protein GI | 150398573 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGGT TCAAAGCATA TTTCTGGCCC ATTGTCGGGC TTATGGCCAT CGTGATTTCG GTGCGCGCCC TTATCGATGA ACTACGCGGC CTGTCGCTCA ACGAATTCCT GGCAAGCTTC CAGGCCATAT CGCTTGAAAG CTGGCTGCTC GCAATCGGTT CGACGCTTCT GGCCTATGCG GCTCTTGCCG CTTACGACAA GCTGGCGCTC GACCACCTCG GCCATCGAAT CTCGCTCTGG TTCATCACGC TCTGCTCGTT CACCACCTAT GCATTGTCGC ATAATCTCGG CGCCTCGGTT TTTTCCGGCG CCGTGGTGCG TTATCGCGCC TACCGGTCGA AAGGCCTGAC GGCCGGAGAG GTGGGCGTTC TCGTTGCCTT CTGCTCCTTC ACCTTCACGC TCGGCACGCT GGTGCTCTCG GCAATCGTTC TGATTCTGAA GCCCAACATA ATCGAGAGAT TTTCGGAGTT CCTGCCGCTC GAAATGTCGT TGACGACAGG CGGGCTCATT CTGGCGCTCA TAGCGCTTTA CGTGCTCGGC AGCCTGGTCG GGCTCAGACC TCTGCACACA CGCTGGTTCC AGCTGCACTA TCCGCGGCCC TCCATCGTGC TGAGGCAGTT GATCATCGGC CCTCTGGAGC TTCTGGGTGC TGCCGGCATC ATCTATTTCG CGCTGCCGGA AGCCGGCAAT CCCGGCTACG TCGTCATTCT CGGCATTTTC CTGGCATCCT TTTCCGCCGC GCTTCTCTCC CATGCGCCCG GCGGACTCGG CGTGCTCGAA CTCGTCTTCA TCGCTGCGCT TCCGGAAATG GATCCGGCCG ACGTTCTGGC TGCACTGGCA ATTTTCCGGC TGCTCTATCT CCTCATCCCC TTCGTTATGG CTCTGGTTGT TATCCTCGCC TTCGAGCATT CCCGCTTTGT GGAGGAGCGG AGCGAGAAGG AGCCATAG
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Protein sequence | MNRFKAYFWP IVGLMAIVIS VRALIDELRG LSLNEFLASF QAISLESWLL AIGSTLLAYA ALAAYDKLAL DHLGHRISLW FITLCSFTTY ALSHNLGASV FSGAVVRYRA YRSKGLTAGE VGVLVAFCSF TFTLGTLVLS AIVLILKPNI IERFSEFLPL EMSLTTGGLI LALIALYVLG SLVGLRPLHT RWFQLHYPRP SIVLRQLIIG PLELLGAAGI IYFALPEAGN PGYVVILGIF LASFSAALLS HAPGGLGVLE LVFIAALPEM DPADVLAALA IFRLLYLLIP FVMALVVILA FEHSRFVEER SEKEP
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