Gene Smed_3384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3384 
Symbol 
ID5324268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3587713 
End bp3588660 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content59% 
IMG OID640792335 
Producthypothetical protein 
Protein accessionYP_001329040 
Protein GI150398573 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGGT TCAAAGCATA TTTCTGGCCC ATTGTCGGGC TTATGGCCAT CGTGATTTCG 
GTGCGCGCCC TTATCGATGA ACTACGCGGC CTGTCGCTCA ACGAATTCCT GGCAAGCTTC
CAGGCCATAT CGCTTGAAAG CTGGCTGCTC GCAATCGGTT CGACGCTTCT GGCCTATGCG
GCTCTTGCCG CTTACGACAA GCTGGCGCTC GACCACCTCG GCCATCGAAT CTCGCTCTGG
TTCATCACGC TCTGCTCGTT CACCACCTAT GCATTGTCGC ATAATCTCGG CGCCTCGGTT
TTTTCCGGCG CCGTGGTGCG TTATCGCGCC TACCGGTCGA AAGGCCTGAC GGCCGGAGAG
GTGGGCGTTC TCGTTGCCTT CTGCTCCTTC ACCTTCACGC TCGGCACGCT GGTGCTCTCG
GCAATCGTTC TGATTCTGAA GCCCAACATA ATCGAGAGAT TTTCGGAGTT CCTGCCGCTC
GAAATGTCGT TGACGACAGG CGGGCTCATT CTGGCGCTCA TAGCGCTTTA CGTGCTCGGC
AGCCTGGTCG GGCTCAGACC TCTGCACACA CGCTGGTTCC AGCTGCACTA TCCGCGGCCC
TCCATCGTGC TGAGGCAGTT GATCATCGGC CCTCTGGAGC TTCTGGGTGC TGCCGGCATC
ATCTATTTCG CGCTGCCGGA AGCCGGCAAT CCCGGCTACG TCGTCATTCT CGGCATTTTC
CTGGCATCCT TTTCCGCCGC GCTTCTCTCC CATGCGCCCG GCGGACTCGG CGTGCTCGAA
CTCGTCTTCA TCGCTGCGCT TCCGGAAATG GATCCGGCCG ACGTTCTGGC TGCACTGGCA
ATTTTCCGGC TGCTCTATCT CCTCATCCCC TTCGTTATGG CTCTGGTTGT TATCCTCGCC
TTCGAGCATT CCCGCTTTGT GGAGGAGCGG AGCGAGAAGG AGCCATAG
 
Protein sequence
MNRFKAYFWP IVGLMAIVIS VRALIDELRG LSLNEFLASF QAISLESWLL AIGSTLLAYA 
ALAAYDKLAL DHLGHRISLW FITLCSFTTY ALSHNLGASV FSGAVVRYRA YRSKGLTAGE
VGVLVAFCSF TFTLGTLVLS AIVLILKPNI IERFSEFLPL EMSLTTGGLI LALIALYVLG
SLVGLRPLHT RWFQLHYPRP SIVLRQLIIG PLELLGAAGI IYFALPEAGN PGYVVILGIF
LASFSAALLS HAPGGLGVLE LVFIAALPEM DPADVLAALA IFRLLYLLIP FVMALVVILA
FEHSRFVEER SEKEP