Gene Smed_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3382 
Symbol 
ID5324266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3585430 
End bp3585873 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content61% 
IMG OID640792333 
ProductMarR family transcriptional regulator 
Protein accessionYP_001329038 
Protein GI150398571 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA ATCGTATGGA ATCTGCGACT TATCTGGCCA GCCTGTTGGC GAGAGGCTTC 
TCGCGCGCCC TGCAGGAGCG CGGCCAGAAG CTCGGCTTCG CTCCCGGGCA GTTCCCGGTT
CTCCTGGAAT TATGGTCTGA GGAAGGGCTG ACGCAAAGAC AGCTTCTCGA CAGGCTCGAC
ATCGAGCAGG CAACCATGGC CAATACGCTT GCGCGCATGG AGCGTGATGG CCTTATCATC
CGCCGCAAGC ATCCGAACGA CAAGCGCTCG CAACAGATAT TCCTGACGGA TCGAGCCCGC
AAGATGGAGA CGGCTGCGAA GGAGGCCGCA GCGGCGGCGG AGCAGTCGTT GCTGTCCGGC
TTTCACCGCT TCGAGAAGGA GCTGATGCTC GAATATATGC GCATGGCCCT CGCAAACTCG
GCCCGCCAGG GGGAGACTTC CTGA
 
Protein sequence
MAFNRMESAT YLASLLARGF SRALQERGQK LGFAPGQFPV LLELWSEEGL TQRQLLDRLD 
IEQATMANTL ARMERDGLII RRKHPNDKRS QQIFLTDRAR KMETAAKEAA AAAEQSLLSG
FHRFEKELML EYMRMALANS ARQGETS