Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3363 |
Symbol | |
ID | 5324247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3562556 |
End bp | 3564184 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640792314 |
Product | ABC transporter related |
Protein accession | YP_001329019 |
Protein GI | 150398552 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACA CCATCCTCTC CGTGCGCGAC CTCTCCGTCG CCTTTCACCA GGGCGGCGAA ACCTCGCTCG CCGTCGATCG TATCTCGTTC GACATCAAGC GAGGCGAGAC CGTCGCTCTT GTCGGTGAGT CGGGTTCCGG GAAATCGGTC TCGGCCAACT CCATACTGAG GCTGCTTCCC TATCCGGCTG CAAGCCATCC GAGCGGCGAG ATCGTCTTCA ACGGGAAAGA TCTCCTGAAG GTGGGCGAGG ACGAACTCAG GCACGTCCGC GGCAACGACG TGACCATGAT CTTCCAGGAG CCGATGACAT CGCTCAATCC GCTGCATACG ATCGAGCAGC AGATCGGCGA AATCCTGGAA ATCCACCAGA ACCTGAAGGG TGCCGCCGCC CGCGCGAGAA CGCTGGAGCT CCTCGATCAG GTCGGAATCC GCGAAGCGGA GAAGCGCCTC GGCGCCTATC CGCACCAGCT CTCCGGCGGT CAGCGCCAGC GCGTGATGAT CGCGATGGCG CTCGCCAACC GGCCGGAGCT CTTGATCGCC GACGAACCGA CGACGGCGCT CGACGTGACG GTGCAAGCGC AGATCCTCGA GCTTTTGAAG TCGCTCAAGG ACGAGCACGG CATGTCCATG CTGTTCATCA CCCACGACCT CGGCATCGTC CGCAAGATCG CCGATCGGGT CTGCGTCATG ACCAAGGGCA AGATCGTCGA AACCGGACCG ACTGCCGAGA TTTTCGCCAA TCCTCAGCAC GACTATACCC GGCATCTGCT TGCCTCCGAA CCCCGGGGCG AACCGCCTCC CTCCGACACG TCGAGCCCGA TCGTCGTGGA AGCGAGCGGC ATGAAGGTCT GGTTTCCGAT CAAAGCGGGT TTCCTGCGGC GCGTGGTCGA TCACGTCAAG GCGGTGGACG GCATCGATCT GACGCTCCGT GCCGGCCAGA CGCTTGGCGT GGTCGGCGAG TCGGGTTCCG GCAAGACGAC GCTGGGCCTG GCGCTGACGC GGCTGATCTC GTCCAAGGGC CGGATCGCCT TCGTCGGGGA GAACATCGAC GCCCATAGTT TCCGCGAGAT GCGTCCGCTC CGAAATCGGA TGCAGGTGGT GTTCCAGGAC CCTTACGGGT CGCTCAGCCC GCGCATGTCG ATCGCCGACA TCATCGGCGA GGGCTTGAAA ATCCACGAGA AAGCACTGAC GGATAACGAA CGCGACGGGC GCGTCGCCGC CGCTTTGGAA GAGGTCGGCC TCGATCCCGC GACGCGCTGG CGCTATCCGC ACGAGTTCTC CGGCGGCCAG CGCCAGCGCA TTGCCATCGC CCGGGCGATG GTGCTGAAAC CGCAATTCGT CATGCTCGAC GAGCCCACTT CCGCGCTCGA CATGAGCGTG CAGGCCCAGG TCGTCGATCT CCTGCGCGAC CTTCAGCGCA AGCACAATCT CGCTTACCTT TTCATCAGCC ACGATCTCAG GGTCGTGCGC GCGCTCGCAA ACGAGGTGAT CGTCATGCGG CTCGGCAAGG TCGTGGAGCA GGGACCCGCC GAGCGCATCT TCGATGCGCC CGCGGAAGAC TATACACGGG CGCTGATGGC CGCCGCCTTC AATCTCGAAG CGGTCAATCT CGCCGCCGTT CATCAGTAG
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Protein sequence | MTDTILSVRD LSVAFHQGGE TSLAVDRISF DIKRGETVAL VGESGSGKSV SANSILRLLP YPAASHPSGE IVFNGKDLLK VGEDELRHVR GNDVTMIFQE PMTSLNPLHT IEQQIGEILE IHQNLKGAAA RARTLELLDQ VGIREAEKRL GAYPHQLSGG QRQRVMIAMA LANRPELLIA DEPTTALDVT VQAQILELLK SLKDEHGMSM LFITHDLGIV RKIADRVCVM TKGKIVETGP TAEIFANPQH DYTRHLLASE PRGEPPPSDT SSPIVVEASG MKVWFPIKAG FLRRVVDHVK AVDGIDLTLR AGQTLGVVGE SGSGKTTLGL ALTRLISSKG RIAFVGENID AHSFREMRPL RNRMQVVFQD PYGSLSPRMS IADIIGEGLK IHEKALTDNE RDGRVAAALE EVGLDPATRW RYPHEFSGGQ RQRIAIARAM VLKPQFVMLD EPTSALDMSV QAQVVDLLRD LQRKHNLAYL FISHDLRVVR ALANEVIVMR LGKVVEQGPA ERIFDAPAED YTRALMAAAF NLEAVNLAAV HQ
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