| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3356 |
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| Symbol | |
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| ID | 5324240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3555560 |
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| End bp | 3556570 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640792307 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001329012 |
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| Protein GI | 150398545 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCA TAGACATCAC CGTCCTGGGA TTGGCCGGCC TCGTCGCCTT GGCGGCGGCG
GCGCTCGCCT ATGGTTTGCT CTATCCCCGG ATCGAGACCG AAAAGAAAAC CGAAGGCCGC
CTGCTCCGGG TCAGCGCCGC CGAGACGGAC CGAACCAAGA TCAAGGCCGC GCGGGACCGC
GTCAACGAGA TGTCGAAGCG CCGCAAGTCC GTTCAGGATT CGCTGAAGGA ACTCGAGAAG
AAGCAACAGG AAAAATCTGC CAATTCGGCA CCTTCGATGA AGAAACGCCT GCTGCAGGCC
AACCTTTCGA TATCGGTCGC GCAGTTCTAT CTGTTCAGCG CGCTTTTCGG ATTGTTCACC
TTTGTCGTCG TCTTCCTGGC GGGCGCGGGG GCGCTCATTG CCGCGGGTGT TGGGCTGACC
GCCGCCGCCG GGCTGCCGCG CTGGATCGTC GGCTCCAGGA TCAAACGCCG CTGCAGGAAG
TTCCTGGACG AGTTTCCGAA CGCGCTCGAT GTGATGGTCC GATCGATCAA GTCGGGGCTA
CCTCTGAACG ACGCGCTGCG ACTGATCGCA AGCGACGGAC AGGAGCCGGT CAGGACGGAA
TTCCGGCGCG TTGTCGAGTC CCAGCAGGTG GGCCTCAACG TTCCCGAAGC CTGCGCCCGC
ATGATCCACA GCATCCCGCT GCCGGAAGTG AATTTCTTCG CGATCGTCAT CGCCATTCAG
GCGCAGGCGG GCGGCAATCT CTCCGAGGCG CTCGGCAACC TTTCCAAGGT GCTGCGCGAG
CGCAGGAAGA TGAAGGCGAA GGTCAATGCG CTGTCCATGG AAGCCAAGGC ATCCGCCTGC
ATTATCGGAG CACTGCCCTT CATCGTGGCA ACGCTCGTCT ATCTGACGTC GCCCGCCTAC
ATGGCCATTC TTTTCACCGA TCCGCGCGGT CACCTCATAA TGGGCGCCTC CGCCGTGTGG
ATGAGCATCG GTATCTGGAT GATGCGCAAC ATGATCAATT TCGATATTTG A
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| Protein sequence | MFGIDITVLG LAGLVALAAA ALAYGLLYPR IETEKKTEGR LLRVSAAETD RTKIKAARDR
VNEMSKRRKS VQDSLKELEK KQQEKSANSA PSMKKRLLQA NLSISVAQFY LFSALFGLFT
FVVVFLAGAG ALIAAGVGLT AAAGLPRWIV GSRIKRRCRK FLDEFPNALD VMVRSIKSGL
PLNDALRLIA SDGQEPVRTE FRRVVESQQV GLNVPEACAR MIHSIPLPEV NFFAIVIAIQ
AQAGGNLSEA LGNLSKVLRE RRKMKAKVNA LSMEAKASAC IIGALPFIVA TLVYLTSPAY
MAILFTDPRG HLIMGASAVW MSIGIWMMRN MINFDI
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