Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3337 |
Symbol | |
ID | 5324221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3537182 |
End bp | 3538717 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792288 |
Product | ABC transporter related |
Protein accession | YP_001328993 |
Protein GI | 150398526 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.700488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATA TTGCCATCGA ACTGCGTGGA ATAGACAAGA GCTTCGGCCT GGTCCACGCC AACAGAAACA TCAATCTTAA GGTTGGCAAG GGCACGATAC ACGGCATCAT CGGTGAAAAC GGTGCAGGAA AGTCGACGCT GATGTCGATC CTCTACGGCT TTTACCAGGC CGACCGTGGC GAGATCCTGG TCGACGGCAA GGCCGTTTCC ATCCGCGACC CGAATGCCGC GATCTCCGTC GGCATCGGCA TGGTCCATCA GCACTTCATG CTGGTCGAGA ATTTCACCGT TCTCGAAAAC GTCATGCTCG GCGCCGAGGA CAGCCAGATC CTCAACAAGG GCATCGCCAA GGCGAGGCAG GAGCTGAAGC GGCTCGAGAA GGAATATGCG CTCGAGGTCA ACCCGGACGC CGTGATCGAA GAACTGCCGG TCGGTCTCCA GCAGCGTGTG GAAATCCTGA AGGCGCTTTA TCGCAGGGCC GATATCCTTA TCCTCGACGA GCCGACCGGC GTGCTGACGC CGCCGGAGGC CGACCACCTG TTCCGAATCC TCGACCAGCT CAAGGCGCAG GGTAAAACGA TCATCCTCAT AACCCATAAG CTGCGTGAGA TCATGGCGGT CACCGACGAG GTTTCCGTCA TGCGCCGCGG CGAGATGGTG GCGACACGGA CGACCCGCGA AACCTCGGTC GAGGAACTTG CCGAGCTGAT GGTCGGCCGC CGCGTACTGC TTCGCGTCGA AAAAGGCGAG AGCAAACCCG GCGACGTGAA GCTCGCCGTC AAGGGGCTGA CGGTCAGGGA CAGCCGCGGC GTGACGATGG TGGACGACGT CTCCCTGGAG GTCCGGGCGG GCGAAATCGT CGGCATCGCC GGTGTGGCCG GCAACGGCCA GTCGGAACTG CTCGAAGCGA TCGCCGGCAT CCGCAAGGCG GCCTTCGGAG CGGTTCTCCT GAACGGCGAG CCGGTAGACG TCAGGGGCCA TGCGGACCCG GCCGAACTCA GGGAGCGCGG ACTGGCGCAT GTGCCGGAGG ACCGGCATCA CGTCGGGCTC GTGCTCAAAT TCGAGGAGTG CGAGAACGCG ATCCTCGGTT ACCATCATGA TCCGCGCTTC GCGAAGGGCA TGTTCCTCGA CGTCGACGCG ATCCGCAAGG ATGCCGAGGA GAAGATTGCC AAATACGACA TTCGCCCGCC GAATGCGCGG CTGAGGACGG CCAACTTTTC CGGCGGCAAC CAGCAGAAGG TCGTTCTTGC GCGAGAGATG GAACAGGATC CCGACGTCCT GATCATCGGT CAGCCGACCC GCGGCGTCGA TGTCGGCGCG ATTGAATTCA TTCACAAGCG GATCATCGAG ATGCGCGACC AGGGCAAGGC CGTTCTGCTG GTGTCGGTCG AGCTCGACGA GATACGTTCT CTGTCCGACC GCATCCTGGT GATGTTTTCC GGGCGTGTCG TCGGCGAGCG CAGCCCCGAG GCGACCGAGG GCGAGCTCGG CCTGCTGATG GCCGGCGTCG AAGGCCGCAA GGAGGCTGCA GAATGA
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Protein sequence | MDNIAIELRG IDKSFGLVHA NRNINLKVGK GTIHGIIGEN GAGKSTLMSI LYGFYQADRG EILVDGKAVS IRDPNAAISV GIGMVHQHFM LVENFTVLEN VMLGAEDSQI LNKGIAKARQ ELKRLEKEYA LEVNPDAVIE ELPVGLQQRV EILKALYRRA DILILDEPTG VLTPPEADHL FRILDQLKAQ GKTIILITHK LREIMAVTDE VSVMRRGEMV ATRTTRETSV EELAELMVGR RVLLRVEKGE SKPGDVKLAV KGLTVRDSRG VTMVDDVSLE VRAGEIVGIA GVAGNGQSEL LEAIAGIRKA AFGAVLLNGE PVDVRGHADP AELRERGLAH VPEDRHHVGL VLKFEECENA ILGYHHDPRF AKGMFLDVDA IRKDAEEKIA KYDIRPPNAR LRTANFSGGN QQKVVLAREM EQDPDVLIIG QPTRGVDVGA IEFIHKRIIE MRDQGKAVLL VSVELDEIRS LSDRILVMFS GRVVGERSPE ATEGELGLLM AGVEGRKEAA E
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