Gene Smed_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3337 
Symbol 
ID5324221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3537182 
End bp3538717 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content62% 
IMG OID640792288 
ProductABC transporter related 
Protein accessionYP_001328993 
Protein GI150398526 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.700488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATA TTGCCATCGA ACTGCGTGGA ATAGACAAGA GCTTCGGCCT GGTCCACGCC 
AACAGAAACA TCAATCTTAA GGTTGGCAAG GGCACGATAC ACGGCATCAT CGGTGAAAAC
GGTGCAGGAA AGTCGACGCT GATGTCGATC CTCTACGGCT TTTACCAGGC CGACCGTGGC
GAGATCCTGG TCGACGGCAA GGCCGTTTCC ATCCGCGACC CGAATGCCGC GATCTCCGTC
GGCATCGGCA TGGTCCATCA GCACTTCATG CTGGTCGAGA ATTTCACCGT TCTCGAAAAC
GTCATGCTCG GCGCCGAGGA CAGCCAGATC CTCAACAAGG GCATCGCCAA GGCGAGGCAG
GAGCTGAAGC GGCTCGAGAA GGAATATGCG CTCGAGGTCA ACCCGGACGC CGTGATCGAA
GAACTGCCGG TCGGTCTCCA GCAGCGTGTG GAAATCCTGA AGGCGCTTTA TCGCAGGGCC
GATATCCTTA TCCTCGACGA GCCGACCGGC GTGCTGACGC CGCCGGAGGC CGACCACCTG
TTCCGAATCC TCGACCAGCT CAAGGCGCAG GGTAAAACGA TCATCCTCAT AACCCATAAG
CTGCGTGAGA TCATGGCGGT CACCGACGAG GTTTCCGTCA TGCGCCGCGG CGAGATGGTG
GCGACACGGA CGACCCGCGA AACCTCGGTC GAGGAACTTG CCGAGCTGAT GGTCGGCCGC
CGCGTACTGC TTCGCGTCGA AAAAGGCGAG AGCAAACCCG GCGACGTGAA GCTCGCCGTC
AAGGGGCTGA CGGTCAGGGA CAGCCGCGGC GTGACGATGG TGGACGACGT CTCCCTGGAG
GTCCGGGCGG GCGAAATCGT CGGCATCGCC GGTGTGGCCG GCAACGGCCA GTCGGAACTG
CTCGAAGCGA TCGCCGGCAT CCGCAAGGCG GCCTTCGGAG CGGTTCTCCT GAACGGCGAG
CCGGTAGACG TCAGGGGCCA TGCGGACCCG GCCGAACTCA GGGAGCGCGG ACTGGCGCAT
GTGCCGGAGG ACCGGCATCA CGTCGGGCTC GTGCTCAAAT TCGAGGAGTG CGAGAACGCG
ATCCTCGGTT ACCATCATGA TCCGCGCTTC GCGAAGGGCA TGTTCCTCGA CGTCGACGCG
ATCCGCAAGG ATGCCGAGGA GAAGATTGCC AAATACGACA TTCGCCCGCC GAATGCGCGG
CTGAGGACGG CCAACTTTTC CGGCGGCAAC CAGCAGAAGG TCGTTCTTGC GCGAGAGATG
GAACAGGATC CCGACGTCCT GATCATCGGT CAGCCGACCC GCGGCGTCGA TGTCGGCGCG
ATTGAATTCA TTCACAAGCG GATCATCGAG ATGCGCGACC AGGGCAAGGC CGTTCTGCTG
GTGTCGGTCG AGCTCGACGA GATACGTTCT CTGTCCGACC GCATCCTGGT GATGTTTTCC
GGGCGTGTCG TCGGCGAGCG CAGCCCCGAG GCGACCGAGG GCGAGCTCGG CCTGCTGATG
GCCGGCGTCG AAGGCCGCAA GGAGGCTGCA GAATGA
 
Protein sequence
MDNIAIELRG IDKSFGLVHA NRNINLKVGK GTIHGIIGEN GAGKSTLMSI LYGFYQADRG 
EILVDGKAVS IRDPNAAISV GIGMVHQHFM LVENFTVLEN VMLGAEDSQI LNKGIAKARQ
ELKRLEKEYA LEVNPDAVIE ELPVGLQQRV EILKALYRRA DILILDEPTG VLTPPEADHL
FRILDQLKAQ GKTIILITHK LREIMAVTDE VSVMRRGEMV ATRTTRETSV EELAELMVGR
RVLLRVEKGE SKPGDVKLAV KGLTVRDSRG VTMVDDVSLE VRAGEIVGIA GVAGNGQSEL
LEAIAGIRKA AFGAVLLNGE PVDVRGHADP AELRERGLAH VPEDRHHVGL VLKFEECENA
ILGYHHDPRF AKGMFLDVDA IRKDAEEKIA KYDIRPPNAR LRTANFSGGN QQKVVLAREM
EQDPDVLIIG QPTRGVDVGA IEFIHKRIIE MRDQGKAVLL VSVELDEIRS LSDRILVMFS
GRVVGERSPE ATEGELGLLM AGVEGRKEAA E