Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3336 |
Symbol | |
ID | 5324220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3534676 |
End bp | 3536910 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640792287 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001328992 |
Protein GI | 150398525 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.812406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGCA TATTTCGGGA AACGAGATTC CGGGTCGAGG GAATGGATTG CGCATCCTGC GCGGCGAAGA TCGACACGGC CGTCAGGCGG GTGTCTGGCG TCGAGGACGT CAACGTGTCG GTGGCTGCGG GAACGATGAC GGTACGGCAT GCGGCGCGCG ACGATGTCGG TGCGCAGGTG ATGCGCAAAG TCGGCGGTCT CGGCTACAGG CTGTCGCCGC TTCGCGGCGA GAGGGACCGG CAGGATGCCG GCGAGGGTGT TTGCTGCGGG CACGACCATT CGGTGAACGA AGCTTCGCAC CGCCACGATC ATGGCGATGA TAAGGTTCTG CCGGCAGCCG CCAGGACTGC CGGTGCCACA GCGCCATTGC AGTGGTGGCA GACGGCAAAA GGCAAGCTCA CGCTCGCCTG CGGCCTGAGC CTCGCTGCGG CCTATGTTAT CGGCACATTC GTTCCTGCCA GCGATCCCTG GATTTTCACG CTTGCGATGC TTGTCGGCCT GATGCCGATC GCAAGACGGG CATTCATGGC TGCGATCTCC GGCACTCCTT TCTCGATCGA GATGCTGATG ACCATTGCGG CTGCCGGTGC CGTTTTCATC GGTGCCGGCG AGGAAGCGGC CATGGTCGTC TTTCTCTTCC TGATAGGTGA ACTGCTCGAG GGCGTTGCCG CGGGCAAGGC GCGGGCGAGC ATCCAGTCGC TTTCGGCACT GGTGCCGAAA TCGGCGCTTC TCGAGGAGAA CGGCCGGACG GTTGAGGTTC CCGCAGAGAG CCTGGCGCCT GGCGCTGTCG TTCTCGTCCG CCCTGGCGAC CGGCTACCCG CCGATGGCGT CATCGTCGCC GGCGAGAGCA GCGTCGACGA GGCGCCGGTC ACCGGCGAAA GCACGCCTGT CCTCAAGGGA GCCGGGGCGG ATGTCTTTGC CGGAACGGTC AACGGCGATG GGGCGCTTCG CGTGTGTGTC ACCGCCGCCG CGGCCGATAA TACCATCGCG CGCGTCATTC GGCTGGTGGA GGAGGCGCAG GAGAAGAAGG CCCCGACGGA ACGTTTCATC GATCGCTTCT CGCGCTACTA CACGCCTGCC GTCGTGCTGG TTGCGGCCCT GGTTGCGATC GTGCCGCCGC TCTTCTTCGG CGGTCTGTGG CAGGAGTGGA TCTATAAGGG CCTCGCGCTT CTCCTGATAG GCTGCCCCTG CGCGCTCGTC ATTTCGACGC CGGCCGCCAT TGCAGCGAGC CTCTCGGCGG GCGCGCGCCG GGGCCTTCTG ATCAAGGGCG GCGCGGTCCT CGAAACCCTC GGCGGGATCA CGGCCGTCGC CTTCGACAAG ACCGGGACAC TTACCGAAGG CAAGCCTAAG CTGACCGACA TCGTCGGTTT CGGCAGATCG GAGGCAGAGG TCCTCGGCTA TGCCGCTGCG CTCGAACAGG GCTCCAGCCA TCCGCTGGCA CGAGCCGTCC TTTGGCGGGC TGAGGCCGAT GGATTAACGC CCGCTCCTGT CGAAGATGCC AGGGCCATCG GGGGCAAGGG CGTTGCCGCG TTCGCAAACG GCGTCGAGCT TTTTCTGGGC TCGCCCGAGG CGGCCGGGGA GCGGGCGCCA CTGGACGCCG GGGAGAAGGC GGAGATAGAG GCATTGCAGC GGGCGGGTAA AACTGTCTCC GTTCTGATTG TCGGCGGCAA GGCGGCCGGG GCGCTTGCCA TGCGCGATGA ACCGCGTGCG GATGCCGCAG CGGGCCTCAG AGCGCTCGCC GAAGCCGGCC TGCGCGTGGT GATGCTTACC GGCGACAACC GTGCGACCGC CGAGGCGATT GCAGGGCGTC TCGGCGGCAT AGAGGCGCAT GCCGGGCTTC TTCCCGAGGA CAAACAGCGC ATCGTCAACA GGCTCAAGAC GGAAGGATTC GTCGTGGCCA AGGTCGGCGA CGGGATCAAC GATGCGCCGG CGCTCGCTGC AGCGGATGTC GGGATCGCCG TCGGCGGCGG CACCGATGTT GCGCTCGAAA CGGCCGACGC CGCCAGCCTC CATGCCCGCG TCTCCGACAT TGCGGCAATG GTGAGGCTTT CGCGGGTGAC GATGCGCAAC ATCCACCAGA ACATCGCGAT CGCACTCGGC CTGAAGGCCG TGTTCCTGGT CACGACGATC GCGGGCATAA CGGGCCTCTG GCCGGCGATC CTCGCCGATA CCGGGGCGAC GGTGCTGGTG ACGATGAATG CGCTGAGATT GCTCGCTTCG CCGGTCAAGC GTTGA
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Protein sequence | MTGIFRETRF RVEGMDCASC AAKIDTAVRR VSGVEDVNVS VAAGTMTVRH AARDDVGAQV MRKVGGLGYR LSPLRGERDR QDAGEGVCCG HDHSVNEASH RHDHGDDKVL PAAARTAGAT APLQWWQTAK GKLTLACGLS LAAAYVIGTF VPASDPWIFT LAMLVGLMPI ARRAFMAAIS GTPFSIEMLM TIAAAGAVFI GAGEEAAMVV FLFLIGELLE GVAAGKARAS IQSLSALVPK SALLEENGRT VEVPAESLAP GAVVLVRPGD RLPADGVIVA GESSVDEAPV TGESTPVLKG AGADVFAGTV NGDGALRVCV TAAAADNTIA RVIRLVEEAQ EKKAPTERFI DRFSRYYTPA VVLVAALVAI VPPLFFGGLW QEWIYKGLAL LLIGCPCALV ISTPAAIAAS LSAGARRGLL IKGGAVLETL GGITAVAFDK TGTLTEGKPK LTDIVGFGRS EAEVLGYAAA LEQGSSHPLA RAVLWRAEAD GLTPAPVEDA RAIGGKGVAA FANGVELFLG SPEAAGERAP LDAGEKAEIE ALQRAGKTVS VLIVGGKAAG ALAMRDEPRA DAAAGLRALA EAGLRVVMLT GDNRATAEAI AGRLGGIEAH AGLLPEDKQR IVNRLKTEGF VVAKVGDGIN DAPALAAADV GIAVGGGTDV ALETADAASL HARVSDIAAM VRLSRVTMRN IHQNIAIALG LKAVFLVTTI AGITGLWPAI LADTGATVLV TMNALRLLAS PVKR
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