| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3306 |
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| Symbol | |
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| ID | 5324190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3496870 |
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| End bp | 3498555 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792258 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001328963 |
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| Protein GI | 150398496 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.32832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.98941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCC GCATCACCGA TGCCAAGGCC GACCCGATCA CCACCGAGGT CATTCGCCAC
GCGCTGAATT CGGCCGCCAA CCAGATGAAG CGCGCTTTGA TCCGCACCTC ATTTTCGCCG
ATCATCTACG AAGTGCTCGA TTTCGCCGCG GCCATCTATG ACAAGGAAGT CCGGCTTCTG
TCGCAGGCGC CGTCGCTGCC GATGTTCATG GGGACCCTGT CCTTCTGCAT CATCGAGGCC
GTCAAGGCCA ATGGCGGGCC GGAAACCCTC AAGCCCGGCG ATGCTCTGAT CTATAACTGG
CCATTCGGAA CCGGCTCACA TCCGCAGGAC GTGGTCATCA TCATGCCGGT CTTCTTTCGG
GATGAGGAGC TGATCGGCTA TACAGCGATG AAGGGACATT GGCTGGATAT CGGCGCCAAG
GATCCCTATT GCACCGACAC GACGGATGTT TTCCAGGAGG GCGTGATCTT CCCGGGCGTC
AAGATCTACA AGGAAAATGT TCTCAACGAC GACATTTTCC GGATGATCAT GGCCAATACG
CGGGTTCCCC AAATGGTGCG CGGAGACCTC GACGCGCAGG TCACGGGCTG CCGGGTGGGC
GTCAAATCGC TGATCGAGGT GATCGAGCGG TTTGGGCTCG AAACCTACCG GGCCGCGGTC
GACGACATGT TCGACCATGG CGAACGTATC GTCCGCTCTT ATTTCGAGAA GATCCCCGAC
GGCCGCTATG TCGGCAAGGG CGAAATGGAC AATAACGGCG TCACCACGGA CCGTATTCCC
TTCGAGGTCG TGCTTGAAGT CAGGGGTTCG GACGTCATCC TCGACTTTTC CGGCGTGCCC
GACGAGCAGG CCGGGCCGAC AAACTCGCCG CTGCCCACCA CCATTTCGGC CAGCCGGGTG
GCGATCACCA TGCTGGCCGG CTATGGCGAA GCGCCGCATG AGGGTCACTT TCGGCCGCTC
AAGGTCATCA CCCGCCCCGG CTCGATGTTC GACCCGCTGC CGCCGGCACC GTCCTTCATC
TATGGATGGC CGGGCCTGCA GGCGATCGAA GTCATCTATA ACGCCGTCGC GCACGCCATG
CCCAAGGCCG TGCCCGCCCA ATCCGGCGGT TGCATCTGCT CTGTCGTGGC CTGGGGAAGC
CGGGAGGAAA GCGGCGAGCC CTGGGCGGAC GGCACGCCGC TGCCGACGGG ACAGGGGGCC
TGGGACGGCG GTGATGGAGG CATCATGCTG CATATCGCCG AATCCGCCAC CCGCTTCACC
CCGGCCGAAG TCTGGGAGCA CCGCAATCCC TGGATCATCG AGCAGCTGGC GCTGGCCGAG
GATTCCGTCG GACCGGGCAA GTGGCGCGGC GGACCTGGCC TCAATCTCGA TATCCGCATG
ACAGAGGACA CGCTGATCAC CACCGTCTTC GACCGCACGC TCAATGCCCC CTGGGGCCTG
TTGGGCGGCA AGGAGGCACG GCCGAACAAT TGTTTCGCCA AAATGCCGGA TGGCGAAGTT
CATTCCATCG CCAAATCGAC GCATTTCCAC ATGCCCAAGG ATTCGGTGCT GCAAACCCGC
ACCGGCGGCG GCGGCGGCTA TGGCGACCCC GCCGAGCGGC CGGTCGAGAT GGTCAAGCGC
GACCTGGCCG ATGGCTACAT CACCGAGGAT TATGCGCGAA AGCACTATCC GCACGCGTTT
TCGTGA
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| Protein sequence | MFGRITDAKA DPITTEVIRH ALNSAANQMK RALIRTSFSP IIYEVLDFAA AIYDKEVRLL
SQAPSLPMFM GTLSFCIIEA VKANGGPETL KPGDALIYNW PFGTGSHPQD VVIIMPVFFR
DEELIGYTAM KGHWLDIGAK DPYCTDTTDV FQEGVIFPGV KIYKENVLND DIFRMIMANT
RVPQMVRGDL DAQVTGCRVG VKSLIEVIER FGLETYRAAV DDMFDHGERI VRSYFEKIPD
GRYVGKGEMD NNGVTTDRIP FEVVLEVRGS DVILDFSGVP DEQAGPTNSP LPTTISASRV
AITMLAGYGE APHEGHFRPL KVITRPGSMF DPLPPAPSFI YGWPGLQAIE VIYNAVAHAM
PKAVPAQSGG CICSVVAWGS REESGEPWAD GTPLPTGQGA WDGGDGGIML HIAESATRFT
PAEVWEHRNP WIIEQLALAE DSVGPGKWRG GPGLNLDIRM TEDTLITTVF DRTLNAPWGL
LGGKEARPNN CFAKMPDGEV HSIAKSTHFH MPKDSVLQTR TGGGGGYGDP AERPVEMVKR
DLADGYITED YARKHYPHAF S
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