Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3303 |
Symbol | |
ID | 5324187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3493831 |
End bp | 3494859 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792255 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001328960 |
Protein GI | 150398493 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAC CTCCTATGTC CATCCCGCTT TTGGAAGTGA CCGGTCTCAA AACCTCATTC ACGACCCCGC GCGGAACAGT AAAAAGCGTC GATGACGTTT CCTTTTCGAT TGCCGCCGGC AAAACGCTCG GCGTGGTCGG GGAATCCGGC TCGGGCAAAA GCGTCACATC GCTCTCCATC ATGCGGCTGG TCGGCCGTGG TGGCGGGGTG ATCGATGATG GTGCGATCCG CCTTAACCTG CCGGGACAGC CCGGTCTGGA TATCCGCGCG CTGGACGAAA AGGCGATGCG CAAGGTGCGC GGCAACGATA TCGCCATGAT CTTCCAAGAA CCGATGACCA GCCTCGATCC GGTCTGGTCG ATCGGCGACC AGACCATAGA GGCCATCCGC CTGCATCAGG ATGTCAGCAA AAATGAAGCT CGCGAAAAAG CGATCGAAAT GCTCAGGCTC GTCGGAATTT CGGCCCCGGA ATCGCGCGTC GATGATTTTC CCCACCAGCT CTCAGGCGGC ATGCGCCAGC GGGTGATGAT CGCCATCGCA CTGTCCTGCC GCCCGGCATT GCTGATCGCC GACGAGCCGA CCACCGCGCT CGACGTCACC ATTCAGGCCC AGATCCTCGA CCTTATTCGC CGGCTGCAAA AGGAAATCGG CATGTCTGTG CTGTTCATCA CTCATAATCT CGGTGTCGTC GCCGAGATCG CCGACAAGGT GGCGGTGATG TATGCCGGCC AGGTGGTTGA GGAAGGCCCC GTCCGGACGA TTTTTTCCGC ACCCCGCCAC CCTTATACGG TCGGCCTGCT CAAATCGATC CCGATGCCGG GCGGAATGCG CGTGGACGAC GCCGGCTCGC GCCGGCTCGA CACGATCGGC GGCATGCCTC CCAATCCGCT GGCTTTGCCG GCCGGATGCC GGTTCGCGCC GCGCTGCTCG CTGGCAATCG AGGACTGTCA TAAGGCACCG CCGCCTCTGG TGCAGGCCGG CGACGAGCAT GGTGTCCGCT GCATTCGCTG GCAGGAGGTA AGTAAATGA
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Protein sequence | MTEPPMSIPL LEVTGLKTSF TTPRGTVKSV DDVSFSIAAG KTLGVVGESG SGKSVTSLSI MRLVGRGGGV IDDGAIRLNL PGQPGLDIRA LDEKAMRKVR GNDIAMIFQE PMTSLDPVWS IGDQTIEAIR LHQDVSKNEA REKAIEMLRL VGISAPESRV DDFPHQLSGG MRQRVMIAIA LSCRPALLIA DEPTTALDVT IQAQILDLIR RLQKEIGMSV LFITHNLGVV AEIADKVAVM YAGQVVEEGP VRTIFSAPRH PYTVGLLKSI PMPGGMRVDD AGSRRLDTIG GMPPNPLALP AGCRFAPRCS LAIEDCHKAP PPLVQAGDEH GVRCIRWQEV SK
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