Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3273 |
Symbol | |
ID | 5324152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3454265 |
End bp | 3454849 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640792221 |
Product | two component Fis family transcriptional regulator |
Protein accession | YP_001328932 |
Protein GI | 150398465 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA AGTCGACGCC TGCGCCAATC ACCCACGCCG CGGATGCGGA CCTGATCGGA CCCGACAAGA GCCTTCTGAT CGTCGATGAC GACACCGCTT TTCTGCGGCG CCTCGCCCGC GCGATGGAAG CGCGCGGCTT CGCGGTAGAG ATCGCCGAGT CGGTTGCCGA AGGCATAGCC AAAGCCAAGA CTCGGCCACC GAAACATGCA GTCATCGATC TCCGCCTTGG CGACGGCAGC GGTCTCGACG TGATCGAGGC AATCCGCGGG CGTCGCGACG ACACGCGGAT GATCGTTCTA ACGGGTTATG GTAATATCGC GACCGCGGTC AACGCCGTGA AGCTCGGAGC GCTCGACTAT CTGGCAAAAC CGGCGGACGC CGATGACATT CTCGCAGCAT TGATTCAGCG CCCGGGCGAA CGGGTAGAGC CCCCGGAGAA CCCCATGTCG GCGGACCGCG TCCGATGGGA GCATATCCAG CGCGTCTACG AAATGTGCGA ACGCAATGTT TCGGAAACGG CGCGCCGGCT AAACATGCAC CGGCGGACCT TGCAGCGCAT TCTGGCGAAA CGGGCCCCGA AATAG
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Protein sequence | MIEKSTPAPI THAADADLIG PDKSLLIVDD DTAFLRRLAR AMEARGFAVE IAESVAEGIA KAKTRPPKHA VIDLRLGDGS GLDVIEAIRG RRDDTRMIVL TGYGNIATAV NAVKLGALDY LAKPADADDI LAALIQRPGE RVEPPENPMS ADRVRWEHIQ RVYEMCERNV SETARRLNMH RRTLQRILAK RAPK
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