Gene Smed_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3271 
Symbol 
ID5324150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3452834 
End bp3453508 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content62% 
IMG OID640792219 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001328930 
Protein GI150398463 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCC GCAACGCTCT CCTTCTGTGC AGCCTGGCGG CCACCCTTGG CCTGACCGGC 
TGTTCACAGA CCACAACCAC GGCCGGCTCT CCTACCGAGG GCGAAAAAGT GGCGACGAAT
CAGATATTCT CCAGCAATTA TGGCCCTGTT GAGGACCACG GATATGCGGT TCCAGGCGTC
CCGATCAACC GCGTAGACCA GCGTTTCCAC CGGCAGATCG TGGATTACCC GACAAAGGAA
CGTCCCGGAA CGATCGTCGT CAACACGCCA AGCCGCTTCC TCTATTACGT GCTGCCGGGT
GGGAAAGCGG TTCGCTACGG GATCGGGGTC GGCAAGCAGG GTTTCGCCTG GGAAGGCGAG
GCCTATGTTG CCTGGAAGCA GGAATGGCCG ACCTGGCATC CGCCGAAGGA AATGGCCGAG
CGCAAGCCGG AAGTCGCTAG ATATGTCGAT GCCGGCATGG GTCCGGGTAT CGGTAACCCA
CTCGGCGCGC GCGCCCTCTA CCTCTTCAAC AAGGAGGGCA AGGACACGCT GTTCCGCCTG
CACGGCACGC CTGAATGGTC CTCCATCGGT ACCGCCGCCT CGTCCGGCTG CATACGCCTG
ATGAACCAGG ACATCATGGA TCTCTATTCA CGGGTCCGCC CCGGCCGCAG CGCACGCGTC
GTCGTGCAGC AGTAA
 
Protein sequence
MRFRNALLLC SLAATLGLTG CSQTTTTAGS PTEGEKVATN QIFSSNYGPV EDHGYAVPGV 
PINRVDQRFH RQIVDYPTKE RPGTIVVNTP SRFLYYVLPG GKAVRYGIGV GKQGFAWEGE
AYVAWKQEWP TWHPPKEMAE RKPEVARYVD AGMGPGIGNP LGARALYLFN KEGKDTLFRL
HGTPEWSSIG TAASSGCIRL MNQDIMDLYS RVRPGRSARV VVQQ